ABR070C (Ashbya gossypii)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 ABR070C T15250_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Q75DF6 CCHC ZF 172 187

Links

Other CCHC ZF family RBPs
Other Ashbya gossypii RBPs

52 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
KLTH0D08316g Kluyveromyces thermotolerans KLTH0D08316g N 1.000
Kwal_8261 Kluyveromyces waltii Kwal_8261 N 1.000
SAKL0D13882g Lachancea kluyveri SAKL0D13882g N 0.938
DEHA0G03058g Debaryomyces hansenii DEHA0G03058g N 0.938
Scas_Contig641.28 Saccharomyces castellii Scas_Contig641.28 N 0.938
MPE1 Saccharomyces cerevisiae YKL059C N 0.938
13703_YKL059C Saccharomyces paradoxus 13703_YKL059C N 0.938
14548_YKL059C Saccharomyces bayanus 14548_YKL059C N 0.938
13452_YKL059C Saccharomyces mikatae 13452_YKL059C N 0.938
fgenesh1_pg.C_chr_1.1000545 Pichia stipitis fgenesh1_pg.C_chr_1.1000545 N 0.882
LELG_04332 Lodderomyces elongisporus LELG_04332 N 0.882
A7TMD2_VANPO Vanderwaltozyma polyspora A7TMD2_VANPO N 0.875
ZYRO0E06600g Zygosaccharomyces rouxii ZYRO0E06600g N 0.875
KLLA0C12837g Kluyveromyces lactis KLLA0C12837g N 0.875
fgeneshTM_pm.1_#_792 Tremella mesenterica fgeneshTM_pm.1_#_792 N 0.765
gw1.4.1338.1 Schizophyllum commune gw1.4.1338.1 N 0.765
CAGL0I05456g Candida glabrata CAGL0I05456g N 0.750
estExt_fgenesh1_pg.C_130086 Sporobolomyces roseus estExt_fgenesh1_pg.C_130086 N 0.706
estExt_fgenesh1_pm.C_30270 Myceliophthora thermophila estExt_fgenesh1_pm.C_30270 N 0.706
e_gw1.311.2.1 Postia placenta e_gw1.311.2.1 N 0.706
e_gwh2.3.362.1 Phanerochaete chrysosporium e_gwh2.3.362.1 N 0.706
e_gw1.135.14.1 Postia placenta e_gw1.135.14.1 N 0.706
PredSwiss_ASS2010_1894.1 Pneumocystis carinii PredSwiss_ASS2010_1894.1 N 0.706
PredSwiss_CON1061.1 Pneumocystis carinii PredSwiss_CON1061.1 N 0.706
PredSwiss_CON2858.1 Pneumocystis carinii PredSwiss_CON2858.1 N 0.706
SPBP8B7.15c Schizosaccharomyces pombe SPBP8B7.15c N 0.706
fgenesh1_pm.C_scaffold_1000464 Neurospora tetrasperma fgenesh1_pm.C_scaffold_1000464 N 0.706
estExt_Genewise1Plus.C_22631 Thielavia terrestris estExt_Genewise1Plus.C_22631 N 0.706
eu2.Lbscf0002g03430 Laccaria bicolor eu2.Lbscf0002g03430 N 0.706
estExt_Genewise1.C_11798 Neurospora discreta estExt_Genewise1.C_11798 N 0.706
TEQG_07175 Trichophyton equinum TEQG_07175 N 0.706
Pa_2_10770 Podospora anserina Pa_2_10770 N 0.706
XP_002162513.1 Hydra magnipapillata XP_002162513.1 N 0.706
BC1G_15234 Botrytis cinerea BC1G_15234 N 0.706
CC1G_00892 Coprinopsis cinerea CC1G_00892 N 0.706
GSTUMT00011325001 Tuber melanosporum GSTUMT00011325001 N 0.706
Genemark.8861_g Serpula lacrymans Genemark.8861_g N 0.706
estExt_fgenesh2_kg.C_60291 Agaricus bisporus estExt_fgenesh2_kg.C_60291 N 0.706
estExt_fgenesh2_pm.C_60269 Heterobasidion annosum estExt_fgenesh2_pm.C_60269 N 0.706
estExt_Genewise1.C_60832 Pleurotus ostreatus estExt_Genewise1.C_60832 N 0.706
CHGG_07192 Chaetomium globosum CHGG_07192 N 0.706
CNBG_0786 Cryptococcus neoformans CNBG_0786 N 0.706
TERG_04664 Trichophyton rubrum TERG_04664 N 0.706
TESG_06028 Trichophyton tonsurans TESG_06028 N 0.706
VDAG_00026 Verticillium dahliae VDAG_00026 N 0.706
VDBG_00415 Verticillium albo atrum VDBG_00415 N 0.706
SS1G_05474 Sclerotinia sclerotiorum SS1G_05474 N 0.706
MGYG_01930 Microsporum gypseum MGYG_01930 N 0.706
GLRG_03342 Colletotrichum graminicola GLRG_03342 N 0.706
MCYG_01387 Microsporum canis MCYG_01387 N 0.706
MGG_09536 Magnaporthe oryzae MGG_09536 N 0.706
NCU06718 Neurospora crassa NCU06718 N 0.706