CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Kwal_8261
(
Kluyveromyces waltii
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
Kwal_8261
T15911_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Kwal_8261
CCHC ZF
176
191
CYRCGGKDHWIKNCPT
Links
Other
CCHC ZF
family RBPs
Other
Kluyveromyces waltii
RBPs
52 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ABR070C
Ashbya gossypii
ABR070C
N
1.000
KLTH0D08316g
Kluyveromyces thermotolerans
KLTH0D08316g
N
1.000
14548_YKL059C
Saccharomyces bayanus
14548_YKL059C
N
0.938
DEHA0G03058g
Debaryomyces hansenii
DEHA0G03058g
N
0.938
MPE1
Saccharomyces cerevisiae
YKL059C
N
0.938
13452_YKL059C
Saccharomyces mikatae
13452_YKL059C
N
0.938
13703_YKL059C
Saccharomyces paradoxus
13703_YKL059C
N
0.938
Scas_Contig641.28
Saccharomyces castellii
Scas_Contig641.28
N
0.938
SAKL0D13882g
Lachancea kluyveri
SAKL0D13882g
N
0.938
LELG_04332
Lodderomyces elongisporus
LELG_04332
N
0.882
fgenesh1_pg.C_chr_1.1000545
Pichia stipitis
fgenesh1_pg.C_chr_1.1000545
N
0.882
A7TMD2_VANPO
Vanderwaltozyma polyspora
A7TMD2_VANPO
N
0.875
ZYRO0E06600g
Zygosaccharomyces rouxii
ZYRO0E06600g
N
0.875
KLLA0C12837g
Kluyveromyces lactis
KLLA0C12837g
N
0.875
fgeneshTM_pm.1_#_792
Tremella mesenterica
fgeneshTM_pm.1_#_792
N
0.765
gw1.4.1338.1
Schizophyllum commune
gw1.4.1338.1
N
0.765
CAGL0I05456g
Candida glabrata
CAGL0I05456g
N
0.750
Genemark.8861_g
Serpula lacrymans
Genemark.8861_g
N
0.706
fgenesh1_pm.C_scaffold_1000464
Neurospora tetrasperma
fgenesh1_pm.C_scaffold_1000464
N
0.706
GSTUMT00011325001
Tuber melanosporum
GSTUMT00011325001
N
0.706
eu2.Lbscf0002g03430
Laccaria bicolor
eu2.Lbscf0002g03430
N
0.706
PredSwiss_ASS2010_1894.1
Pneumocystis carinii
PredSwiss_ASS2010_1894.1
N
0.706
estExt_Genewise1.C_60832
Pleurotus ostreatus
estExt_Genewise1.C_60832
N
0.706
estExt_fgenesh2_kg.C_60291
Agaricus bisporus
estExt_fgenesh2_kg.C_60291
N
0.706
estExt_fgenesh2_pm.C_60269
Heterobasidion annosum
estExt_fgenesh2_pm.C_60269
N
0.706
PredSwiss_CON2858.1
Pneumocystis carinii
PredSwiss_CON2858.1
N
0.706
PredSwiss_CON1061.1
Pneumocystis carinii
PredSwiss_CON1061.1
N
0.706
estExt_Genewise1Plus.C_22631
Thielavia terrestris
estExt_Genewise1Plus.C_22631
N
0.706
e_gwh2.3.362.1
Phanerochaete chrysosporium
e_gwh2.3.362.1
N
0.706
MCYG_01387
Microsporum canis
MCYG_01387
N
0.706
MGG_09536
Magnaporthe oryzae
MGG_09536
N
0.706
MGYG_01930
Microsporum gypseum
MGYG_01930
N
0.706
SS1G_05474
Sclerotinia sclerotiorum
SS1G_05474
N
0.706
GLRG_03342
Colletotrichum graminicola
GLRG_03342
N
0.706
CNBG_0786
Cryptococcus neoformans
CNBG_0786
N
0.706
XP_002162513.1
Hydra magnipapillata
XP_002162513.1
N
0.706
BC1G_15234
Botrytis cinerea
BC1G_15234
N
0.706
CC1G_00892
Coprinopsis cinerea
CC1G_00892
N
0.706
CHGG_07192
Chaetomium globosum
CHGG_07192
N
0.706
TEQG_07175
Trichophyton equinum
TEQG_07175
N
0.706
TERG_04664
Trichophyton rubrum
TERG_04664
N
0.706
e_gw1.311.2.1
Postia placenta
e_gw1.311.2.1
N
0.706
Pa_2_10770
Podospora anserina
Pa_2_10770
N
0.706
estExt_fgenesh1_pg.C_130086
Sporobolomyces roseus
estExt_fgenesh1_pg.C_130086
N
0.706
estExt_fgenesh1_pm.C_30270
Myceliophthora thermophila
estExt_fgenesh1_pm.C_30270
N
0.706
e_gw1.135.14.1
Postia placenta
e_gw1.135.14.1
N
0.706
SPBP8B7.15c
Schizosaccharomyces pombe
SPBP8B7.15c
N
0.706
TESG_06028
Trichophyton tonsurans
TESG_06028
N
0.706
VDAG_00026
Verticillium dahliae
VDAG_00026
N
0.706
VDBG_00415
Verticillium albo atrum
VDBG_00415
N
0.706
NCU06718
Neurospora crassa
NCU06718
N
0.706
estExt_Genewise1.C_11798
Neurospora discreta
estExt_Genewise1.C_11798
N
0.706