MDP0000506096 (Malus x domestica)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 MDP0000506096 T16064_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000506096 CCHC ZF 251 268

Links

Other CCHC ZF family RBPs
Other Malus x domestica RBPs

20 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MDP0000541906 Malus x domestica MDP0000541906 N 1.000
MDP0000701448 Malus x domestica MDP0000701448 N 1.000
MDP0000919408 Malus x domestica MDP0000919408 N 1.000
MDP0000390251 Malus x domestica MDP0000390251 N 1.000
MDP0000487820 Malus x domestica MDP0000487820 N 1.000
MDP0000453200 Malus x domestica MDP0000453200 N 1.000
MDP0000640504 Malus x domestica MDP0000640504 N 1.000
MDP0000712562 Malus x domestica MDP0000712562 N 1.000
MDP0000566255 Malus x domestica MDP0000566255 N 1.000
MDP0000549016 Malus x domestica MDP0000549016 N 0.944
MDP0000593278 Malus x domestica MDP0000593278 N 0.944
MDP0000567895 Malus x domestica MDP0000567895 N 0.889
MDP0000740123 Malus x domestica MDP0000740123 N 0.833
cassava4566.m1 Manihot esculenta cassava4566.m1 N 0.778
POPTR_0001s18350 Populus trichocarpa POPTR_0001s18350 N 0.778
MDP0000597218 Malus x domestica MDP0000597218 N 0.778
MDP0000547249 Malus x domestica MDP0000547249 N 0.778
POPTR_0006s13220 Populus trichocarpa POPTR_0006s13220 N 0.722
POPTR_0011s03010 Populus trichocarpa POPTR_0011s03010 N 0.722
POPTR_0019s05880 Populus trichocarpa POPTR_0019s05880 N 0.722