BRADI3G23364 (Brachypodium distachyon)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 BRADI3G23364 T09502_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BRADI3G23364.1 CCHC ZF 234 251

Links

Other CCHC ZF family RBPs
Other Brachypodium distachyon RBPs

30 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BRADI4G42725 Brachypodium distachyon BRADI4G42725 N 1.000
fgenesh1_pg.C_scaffold_32000002 Phytophthora ramorum fgenesh1_pg.C_scaffold_32000002 N 0.778
fgenesh1_pg.C_scaffold_315000002 Phytophthora ramorum fgenesh1_pg.C_scaffold_315000002 N 0.778
fgenesh1_pg.C_scaffold_49000015 Phytophthora ramorum fgenesh1_pg.C_scaffold_49000015 N 0.778
fgenesh1_pg.C_scaffold_2342000001 Phytophthora ramorum fgenesh1_pg.C_scaffold_2342000001 N 0.778
fgenesh1_pg.C_scaffold_58000098 Phytophthora ramorum fgenesh1_pg.C_scaffold_58000098 N 0.778
fgenesh1_pg.C_scaffold_937000002 Phytophthora ramorum fgenesh1_pg.C_scaffold_937000002 N 0.778
fgenesh1_pg.C_scaffold_911000002 Phytophthora ramorum fgenesh1_pg.C_scaffold_911000002 N 0.778
fgenesh1_pg.C_scaffold_737000002 Phytophthora ramorum fgenesh1_pg.C_scaffold_737000002 N 0.778
fgenesh1_pg.C_scaffold_6000001 Phytophthora ramorum fgenesh1_pg.C_scaffold_6000001 N 0.778
fgenesh1_pg.C_scaffold_23000077 Phytophthora ramorum fgenesh1_pg.C_scaffold_23000077 N 0.778
fgenesh1_pg.C_scaffold_2352000001 Phytophthora ramorum fgenesh1_pg.C_scaffold_2352000001 N 0.778
fgenesh1_pg.C_scaffold_135000007 Phytophthora ramorum fgenesh1_pg.C_scaffold_135000007 N 0.778
fgenesh1_pg.C_scaffold_1242000001 Phytophthora ramorum fgenesh1_pg.C_scaffold_1242000001 N 0.778
fgenesh1_pg.C_scaffold_2102000001 Phytophthora ramorum fgenesh1_pg.C_scaffold_2102000001 N 0.778
fgenesh1_pg.C_scaffold_1590000001 Phytophthora ramorum fgenesh1_pg.C_scaffold_1590000001 N 0.778
fgenesh1_pg.C_scaffold_1347000001 Phytophthora ramorum fgenesh1_pg.C_scaffold_1347000001 N 0.778
fgenesh1_pg.C_scaffold_17000001 Phytophthora ramorum fgenesh1_pg.C_scaffold_17000001 N 0.778
fgenesh1_pg.C_scaffold_20000020 Phytophthora ramorum fgenesh1_pg.C_scaffold_20000020 N 0.778
fgenesh1_pg.C_scaffold_2072000002 Phytophthora ramorum fgenesh1_pg.C_scaffold_2072000002 N 0.778
CHGG_06816 Chaetomium globosum CHGG_06816 N 0.722
nasonia_NCBI_hmm135244 Nasonia vitripennis nasonia_NCBI_hmm135244 N 0.722
nasonia_NCBI_hmm16014 Nasonia vitripennis nasonia_NCBI_hmm16014 N 0.722
nasonia_NCBI_hmm216504 Nasonia vitripennis nasonia_NCBI_hmm216504 N 0.722
CHGG_00235 Chaetomium globosum CHGG_00235 N 0.722
estExtDG_fgeneshEH_pg.C_710018 Emiliania huxleyi estExtDG_fgeneshEH_pg.C_710018 N 0.722
estExtDG_fgeneshEH_pg.C_1020080 Emiliania huxleyi estExtDG_fgeneshEH_pg.C_1020080 N 0.722
LOC_Os11g35630 Oryza sativa LOC_Os11g35630 N 0.722
MDP0000649942 Malus x domestica MDP0000649942 N 0.722
Minc05817 Meloidogyne incognita Minc05817 N 0.722