PMAA_102830 (Penicillium marneffei)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 PMAA_102830 T16218_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PMAA_102830.t1 CCHC ZF 223 240

Links

Other CCHC ZF family RBPs
Other Penicillium marneffei RBPs

13 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PMAA_015550 Penicillium marneffei PMAA_015550 N 0.944
BGIBMGA012989 Bombyx mori BGIBMGA012989 N 0.778
estExt_fgenesh2_pg.C_3000025 Branchiostoma floridae estExt_fgenesh2_pg.C_3000025 N 0.722
fgenesh1_pg.C_scaffold_175000012 Daphnia pulex fgenesh1_pg.C_scaffold_175000012 N 0.722
SNAP_00026457 Daphnia pulex SNAP_00026457 N 0.722
e_gw1.4.1014.1 Myceliophthora thermophila e_gw1.4.1014.1 N 0.722
AT5G13205 Arabidopsis thaliana AT5G13205-TAIR-G N 0.722
AT1G48710 Arabidopsis thaliana AT1G48710-TAIR-G N 0.722
AT1G11265 Arabidopsis thaliana AT1G11265-TAIR-G N 0.722
AT1G58140 Arabidopsis thaliana AT1G58140-TAIR-G N 0.722
AT3G59720 Arabidopsis thaliana AT3G59720-TAIR-G N 0.722
AT3G61330 Arabidopsis thaliana AT3G61330-TAIR-G N 0.722
nasonia_NCBI_hmm46134 Nasonia vitripennis nasonia_NCBI_hmm46134 N 0.722