CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Bm1_03385
(
Brugia malayi
)
CSD
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00313 (CSD)
IPR002059
Bm1_03385
T16660_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bm1_03385
CSD
5
77
GVKGKVKWYSVRYHYGFIARDDNKGNDVFVHQTAIAKSRIIKYYLRTLGDGEEVLFDIVQGKQGPEAANVTGP
Links
Other
CSD
family RBPs
Other
Brugia malayi
RBPs
8 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LOAG_08235
Loa loa
LOAG_08235
N
0.932
CBN22260
Caenorhabditis brenneri
CBN22260
N
0.740
CBN20898
Caenorhabditis brenneri
CBN20898
N
0.740
CBN10862
Caenorhabditis brenneri
CBN10862
N
0.740
CBG02238
Caenorhabditis briggsae
CBG02238
N
0.740
cey-2
Caenorhabditis elegans
F46F11.2
N
0.726
CRE03839
Caenorhabditis remanei
CRE03839
N
0.726
PPA14638
Pristionchus pacificus
PPA14638
N
0.712