CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CpipJ_CPIJ008535
(
Culex pipiens
)
CSD
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00313 (CSD)
IPR002059
CpipJ_CPIJ008535
T16666_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CpipJ_CPIJ008535-RA
CSD
22
89
IEEGKVRSFSRSKGHGFIEPASGGDDIFVHISDVEGEYVPLPGDEVSYRLCFIPPKFEKTQAIHVQIT
Links
Other
CSD
family RBPs
Other
Culex pipiens
RBPs
9 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CPIJ008535
Culex quinquefasciatus
CPIJ008535
N
1.000
AGAP005641
Anopheles gambiae
AGAP005641
N
0.882
AAEL009235
Aedes aegypti
AAEL009235
N
0.845
PHUM557470
Pediculus humanus
PHUM557470
N
0.735
BGIBMGA005287
Bombyx mori
BGIBMGA005287
N
0.706
GJ13199
Drosophila virilis
FBgn0200425
N
0.706
GI13370
Drosophila mojavensis
FBgn0136127
N
0.706
GA21978-RA
Drosophila pseudoobscura
FBgn0081963
N
0.706
GL20690
Drosophila persimilis
FBgn0158285
N
0.706