CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CPIJ005674
(
Culex quinquefasciatus
)
CSD
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00313 (CSD)
IPR002059
CPIJ005674
T16741_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CPIJ005674-PA
CSD
155
195
NNQGTRETGIIEKLLIGDPVEFEMTYDRRTGKPIASQVTKI
CPIJ005674-PA
CSD
224
280
SDTTTGRISYENRGECFFLPYTKDDVEGNVTLRAGDKVSFQIATNQRGNLGACHIRL
CPIJ005674-PA
CSD
288
351
KYRGVVCSMKDTFGFIERADVVKEIFFHFSETDNTIELRPGDDVEFIIQTRNQGKEVACNIARL
CPIJ005674-PA
CSD
455
517
REQGVVASLKEGFGFLRCVERNIRLFFHFTEVLDTSREICVDDEVEFTVIQDPGSSFANTRQS
CPIJ005674-PA
CSD
674
738
HHGFIAVLKENFGFIETIEHDQEVFFHFSNFIGNTSALELGHEVEYSLSTRSAVNAGNCIPAENV
CPIJ005674-PA
CSD
830
897
KKQAKVDSVKGLFGFLDFEVEEGKKLFFHMSEVQGGGSLYPGDSVEFSIVTNQASRNGKTSACNMIKV
Links
Other
CSD
family RBPs
Other
Culex quinquefasciatus
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CpipJ_CPIJ005674
Culex pipiens
CpipJ_CPIJ005674
N
1.000
AAEL010018
Aedes aegypti
AAEL010018
N
0.883
AGAP004937
Anopheles gambiae
AGAP004937
N
0.821