CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
AAEL010018
(
Aedes aegypti
)
CSD
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00313 (CSD)
IPR002059
AAEL010018
T16701_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAEL010018-PA
CSD
147
212
RETGIIEKLLHSYGFIQCCERQARLFFHFSQFGGTIEHLKIGDPVEFEMTYDRRTGKPIASQVSKI
AAEL010018-PA
CSD
241
297
SDTTTGRISYENRGECFFLPYTKDDVEGNVCLRAGDKVSFQIATNQRGNLGACHIRL
AAEL010018-PA
CSD
305
368
KYRGVVCSMKDTFGFIERADVVKEIFFHFSETDNTIELRPGDDVEFIIQTRNQGKEVACNIARL
AAEL010018-PA
CSD
472
534
REQGVVASLKEGFGFLRCVERNIRLFFHFTEVLDTSREICVDDEVEFTVIQDPGSSFANTRQS
AAEL010018-PA
CSD
704
769
HHGFIAVLKENFGFIETLEHDQEVFFHFSNFIGNTNTLELGHEVEYSLSTRSAVNAGNCIPAENVK
AAEL010018-PA
CSD
860
925
KKQAKVDSVKGLFGFLDFEVEEGKKLFFHMSEVQGGGCLYPGDSVEFSIVTNQRNGKTSACNMIKV
Links
Other
CSD
family RBPs
Other
Aedes aegypti
RBPs
12 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AGAP004937
Anopheles gambiae
AGAP004937
N
0.910
CpipJ_CPIJ005674
Culex pipiens
CpipJ_CPIJ005674
N
0.883
CPIJ005674
Culex quinquefasciatus
CPIJ005674
N
0.883
GF10107
Drosophila ananassae
FBgn0087148
N
0.741
GA23356-RA
Drosophila pseudoobscura
FBgn0244758
N
0.739
GM24938
Drosophila sechellia
FBgn0179800
N
0.738
GG15082
Drosophila erecta
FBgn0107336
N
0.738
Unr
Drosophila melanogaster
FBgn0035895
N
0.738
GE21305
Drosophila yakuba
FBgn0238572
N
0.738
GH16406
Drosophila grimshawi
FBgn0123877
N
0.736
GI12487
Drosophila mojavensis
FBgn0135244
N
0.736
GK17751
Drosophila willistoni
FBgn0219750
N
0.730