CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSLAFG00000031170
(
Loxodonta africana
)
CSD
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00313 (CSD)
IPR002059
ENSLAFG00000031170
T16883_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLAFP00000024479
CSD
1
43
FVHQTAIRKNNPRKYLRSGGDGETEFDVVEGEKGAEAANVTGP
Links
Other
CSD
family RBPs
Other
Loxodonta africana
RBPs
9 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSOCUG00000024588
Oryctolagus cuniculus
ENSOCUG00000024588
N
0.795
YBX1
Ornithorhynchus anatinus
ENSOANG00000011725
I
0.750
ENSOCUG00000026608
Oryctolagus cuniculus
ENSOCUG00000026608
N
0.750
ENSOCUG00000021258
Oryctolagus cuniculus
ENSOCUG00000021258
N
0.733
Ybx1
Dipodomys ordii
ENSDORG00000016627
N
0.727
Ame_R016026
Ailuropoda melanoleuca
Ame_R016026
N
0.727
YBX1
Tupaia belangeri
ENSTBEG00000015642
N
0.727
ENSGGOG00000023581
Gorilla gorilla
ENSGGOG00000023581
I
0.717
CSDA
Tursiops truncatus
ENSTTRG00000008045
I
0.706