CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSOCUG00000024588
(
Oryctolagus cuniculus
)
CSD
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00313 (CSD)
IPR002059
ENSOCUG00000024588
T16946_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOCUP00000023346
CSD
48
91
VVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGP
Links
Other
CSD
family RBPs
Other
Oryctolagus cuniculus
RBPs
31 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSOCUG00000026608
Oryctolagus cuniculus
ENSOCUG00000026608
N
0.955
ENSOCUG00000021258
Oryctolagus cuniculus
ENSOCUG00000021258
N
0.933
YBX1
Ornithorhynchus anatinus
ENSOANG00000011725
I
0.932
Ame_R016026
Ailuropoda melanoleuca
Ame_R016026
N
0.909
Ybx1
Dipodomys ordii
ENSDORG00000016627
N
0.909
YBX1
Tupaia belangeri
ENSTBEG00000015642
N
0.909
ENSGGOG00000023581
Gorilla gorilla
ENSGGOG00000023581
I
0.870
ybx2
Xenopus tropicalis
ENSXETG00000025267
N
0.864
CSDA
Tursiops truncatus
ENSTTRG00000008045
I
0.843
ENSOCUG00000022716
Oryctolagus cuniculus
ENSOCUG00000022716
N
0.837
YBOX1_RABIT
Oryctolagus cuniculus
ENSOCUG00000028047
I
0.827
ENSETEG00000004125
Echinops telfairi
ENSETEG00000004125
I
0.811
CSDA
Felis catus
ENSFCAG00000018959
I
0.811
ENSGGOG00000004758
Gorilla gorilla
ENSGGOG00000004758
I
0.811
YBX1
Procavia capensis
ENSPCAG00000008397
I
0.811
CSDA
Oryctolagus cuniculus
ENSOCUG00000001889
I
0.811
YB-1
Homo sapiens
ENSG00000065978
D
0.811
Ame_R019252
Ailuropoda melanoleuca
Ame_R019252
I
0.811
ENSSARG00000007896
Sorex araneus
ENSSARG00000007896
I
0.811
YBX2
Pteropus vampyrus
ENSPVAG00000005050
N
0.804
YBX2
Microcebus murinus
ENSMICG00000012453
I
0.804
YBX2
Otolemur garnettii
ENSOGAG00000004392
I
0.804
YBX2
Vicugna pacos
ENSVPAG00000003104
I
0.804
Ame_R016025
Ailuropoda melanoleuca
Ame_R016025
I
0.796
CSDA
Gorilla gorilla
ENSGGOG00000001352
I
0.796
ENSLAFG00000031170
Loxodonta africana
ENSLAFG00000031170
N
0.795
ENSGGOG00000023840
Gorilla gorilla
ENSGGOG00000023840
N
0.795
CSDA
Spermophilus tridecemlineatus
ENSSTOG00000002108
I
0.792
YBX2
Loxodonta africana
ENSLAFG00000014006
I
0.745
CPIJ002248
Culex quinquefasciatus
CPIJ002248
N
0.705
CpipJ_CPIJ002248
Culex pipiens
CpipJ_CPIJ002248
N
0.705