CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSOCUG00000021258
(
Oryctolagus cuniculus
)
CSD
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00313 (CSD)
IPR002059
ENSOCUG00000021258
T16942_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOCUP00000025635
CSD
49
93
SVVHQTAIKKNNPSKYLRSVGDGETVEFDVVEGEKGVEAANVTGP
Links
Other
CSD
family RBPs
Other
Oryctolagus cuniculus
RBPs
29 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSOCUG00000024588
Oryctolagus cuniculus
ENSOCUG00000024588
N
0.933
ENSOCUG00000026608
Oryctolagus cuniculus
ENSOCUG00000026608
N
0.889
YBX1
Ornithorhynchus anatinus
ENSOANG00000011725
I
0.867
Ybx1
Dipodomys ordii
ENSDORG00000016627
N
0.844
YBX1
Tupaia belangeri
ENSTBEG00000015642
N
0.844
Ame_R016026
Ailuropoda melanoleuca
Ame_R016026
N
0.844
ENSOCUG00000022716
Oryctolagus cuniculus
ENSOCUG00000022716
N
0.837
ENSGGOG00000023581
Gorilla gorilla
ENSGGOG00000023581
I
0.826
CSDA
Tursiops truncatus
ENSTTRG00000008045
I
0.804
ybx2
Xenopus tropicalis
ENSXETG00000025267
N
0.800
YBOX1_RABIT
Oryctolagus cuniculus
ENSOCUG00000028047
I
0.788
CSDA
Oryctolagus cuniculus
ENSOCUG00000001889
I
0.774
YB-1
Homo sapiens
ENSG00000065978
D
0.774
ENSGGOG00000004758
Gorilla gorilla
ENSGGOG00000004758
I
0.774
CSDA
Felis catus
ENSFCAG00000018959
I
0.774
ENSETEG00000004125
Echinops telfairi
ENSETEG00000004125
I
0.774
ENSSARG00000007896
Sorex araneus
ENSSARG00000007896
I
0.774
Ame_R019252
Ailuropoda melanoleuca
Ame_R019252
I
0.774
YBX1
Procavia capensis
ENSPCAG00000008397
I
0.774
YBX2
Pteropus vampyrus
ENSPVAG00000005050
N
0.765
YBX2
Microcebus murinus
ENSMICG00000012453
I
0.765
YBX2
Otolemur garnettii
ENSOGAG00000004392
I
0.765
YBX2
Vicugna pacos
ENSVPAG00000003104
I
0.765
CSDA
Gorilla gorilla
ENSGGOG00000001352
I
0.759
Ame_R016025
Ailuropoda melanoleuca
Ame_R016025
I
0.759
CSDA
Spermophilus tridecemlineatus
ENSSTOG00000002108
I
0.755
ENSGGOG00000023840
Gorilla gorilla
ENSGGOG00000023840
N
0.733
ENSLAFG00000031170
Loxodonta africana
ENSLAFG00000031170
N
0.733
YBX2
Loxodonta africana
ENSLAFG00000014006
I
0.709