ENSOGAG00000014939 (Otolemur garnettii)
CSD

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00313 (CSD) IPR002059 ENSOGAG00000014939 T16956_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
YB-1
M111_0.6 		Homo sapiens AACAUCD RNAcompete
Ray et al.(2013)
RNCMPT00116 		0.718
YB-1
M081_0.6 		Homo sapiens AACAUC RNAcompete
Ray et al.(2013)
RNCMPT00083 		0.718
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOGAP00000013380 CSD 51 121

Links

Other CSD family RBPs
Other Otolemur garnettii RBPs

6 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
YBX1 Tarsius syrichta ENSTSYG00000006915 I 0.887
CSDA Otolemur garnettii ENSOGAG00000013245 I 0.873
YBX1 Ochotona princeps ENSOPRG00000008050 I 0.873
YBX2 Macropus eugenii ENSMEUG00000006947 I 0.873
ENSGALG00000018512 Gallus gallus ENSGALG00000018512 I 0.718
Ybx1 Rattus norvegicus ENSRNOG00000032902 I 0.708