CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PTTG_07264
(
Puccinia triticina
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
PTTG_07264
T17792_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PTTG_07264T0
KH
137
196
TLRALVSTKEAGVIIGKGGKTVAEIREQTGTKAGVSKAVQGVHDRIFSVSGGLEGVSKLQ
PTTG_07264T0
KH
211
274
IIRVLVSHNLMGSIIGRQGSKIKEIQDTSGVRMVASKEMLPQSTERVVEVQGTPDAIRVAIHEI
PTTG_07264T0
KH
308
360
GCIIGKGGAKINEIRRLSGSKISIAKTPHDESGERMFTIIGSPEANEKALFLL
Links
Other
KH
family RBPs
Other
Puccinia triticina
RBPs
6 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PGTG_14860
Puccinia graminis
PGTG_14860
N
0.853
estExt_fgenesh1_kg.C_690018
Melampsora laricis populina
estExt_fgenesh1_kg.C_690018
I
0.843
estExt_fgeneshMC_pm.C_50126
Mucor circinelloides
estExt_fgeneshMC_pm.C_50126
I
0.738
UM03654
Ustilago maydis
UM03654
I
0.728
fgenesh3_kg.3_#_30_#_1383_1_CCFG_CCFH
Pleurotus ostreatus
fgenesh3_kg.3_#_30_#_1383_1_CCFG_CCFH
I
0.702
estExt_Genewise1.C_440040
Phycomyces blakesleeanus
estExt_Genewise1.C_440040
I
0.702