fgenesh3_kg.3_#_30_#_1383_1_CCFG_CCFH (Pleurotus ostreatus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 fgenesh3_kg.3_#_30_#_1383_1_CCFG_CCFH T21710_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ANIA_04546
M226_0.6 		Aspergillus nidulans ACCYMA RNAcompete
Ray et al.(2013)
RNCMPT00265 		0.764
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh3_kg.3_#_30_#_1383_1_CCFG_CCFH KH 28 90
fgenesh3_kg.3_#_30_#_1383_1_CCFG_CCFH KH 114 177
fgenesh3_kg.3_#_30_#_1383_1_CCFG_CCFH KH 244 307

Links

Other KH family RBPs
Other Pleurotus ostreatus RBPs

69 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_fgenesh2_pm.C_10587 Agaricus bisporus estExt_fgenesh2_pm.C_10587 I 0.937
e_gwh1.1.1236.1 Laccaria bicolor e_gwh1.1.1236.1 I 0.921
CC1G_06779 Coprinopsis cinerea CC1G_06779 I 0.906
estExt_fgenesh2_kg.C_10919 Serpula lacrymans estExt_fgenesh2_kg.C_10919 I 0.901
estExt_Genewise1Plus.C_560144 Postia placenta estExt_Genewise1Plus.C_560144 I 0.874
fgenesh1_pg.C_scaffold_11000272 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_11000272 I 0.853
estExt_fgenesh1_pm.C_11041 Schizophyllum commune estExt_fgenesh1_pm.C_11041 I 0.817
UM03654 Ustilago maydis UM03654 I 0.801
estExt_fgeneshMC_pm.C_50126 Mucor circinelloides estExt_fgeneshMC_pm.C_50126 I 0.785
estExt_Genewise1.C_440040 Phycomyces blakesleeanus estExt_Genewise1.C_440040 I 0.775
ANIA_04546 Aspergillus nidulans CADANIAG00005892 D 0.764
TRV_06814 Trichophyton verrucosum TRV_06814 I 0.754
ACLA_092010 Aspergillus clavatus CADACLAG00008508 I 0.754
TERG_00415 Trichophyton rubrum TERG_00415 I 0.754
TESG_02394 Trichophyton tonsurans TESG_02394 I 0.754
NFIA_035170 Neosartorya fischeri CADNFIAG00003466 I 0.754
TEQG_01493 Trichophyton equinum TEQG_01493 I 0.754
ATEG_09612 Aspergillus terreus CADATEAG00005390 I 0.754
AO090026000625 Aspergillus oryzae CADAORAG00008641 I 0.754
AFUA_2G02780 Aspergillus fumigatus CADAFUAG00003337 I 0.754
AFLA_133290 Aspergillus flavus CADAFLAG00007208 I 0.754
MGYG_01105 Microsporum gypseum MGYG_01105 I 0.754
Pc18g04820 Penicillium chrysogenum Pc18g04820 I 0.754
MCYG_00862 Microsporum canis MCYG_00862 I 0.754
ARB_05593 Arthroderma benhamiae ARB_05593 I 0.754
gw1.2.1725.1 Mucor circinelloides gw1.2.1725.1 I 0.749
HCAG_06295 Histoplasma capsulatum HCAG_06295 I 0.749
An07g07150 Aspergillus niger CADANGAG00005988 I 0.749
CIMG_01955 Coccidioides immitis CIMG_01955 I 0.749
estExt_fgenesh1_kg.C_690018 Melampsora laricis populina estExt_fgenesh1_kg.C_690018 I 0.749
PABG_02940 Paracoccidioides brasiliensis PABG_02940 I 0.749
BDBG_04961 Blastomyces dermatitidis BDBG_04961 I 0.749
fgenesh1_pg.00009_#_201 Aspergillus carbonarius fgenesh1_pg.00009_#_201 I 0.749
PMAA_044720 Penicillium marneffei PMAA_044720 I 0.743
fgeneshTM_pg.13_#_145 Tremella mesenterica fgeneshTM_pg.13_#_145 I 0.743
UREG_06886 Uncinocarpus reesii UREG_06886 I 0.743
EAT77860.2 Phaeosphaeria nodorum EAT77860.2 I 0.738
SNOG_14668 Stagonospora nodorum SNOG_14668 I 0.738
GLRG_03598 Colletotrichum graminicola GLRG_03598 I 0.738
PTRG_00277 Pyrenophora tritici repentis PTRG_00277 I 0.733
VDAG_06495 Verticillium dahliae VDAG_06495 I 0.733
PGTG_14860 Puccinia graminis PGTG_14860 N 0.733
FVEG_08209 Fusarium verticillioides FVEG_08209 I 0.733
FGSG_06979 Fusarium graminearum FGSG_06979 I 0.733
AB04126.1 Alternaria brassicicola AB04126.1 I 0.733
estExt_Genewise1.C_31967 Thielavia terrestris estExt_Genewise1.C_31967 I 0.728
fgenesh1_pm.C_scaffold_2000184 Trichoderma virens fgenesh1_pm.C_scaffold_2000184 I 0.728
estExt_Genewise1Plus.C_41937 Myceliophthora thermophila estExt_Genewise1Plus.C_41937 I 0.728
estExt_Genewise1Plus.C_11417 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_11417 I 0.728
e_gw1.3.1586.1 Nectria haematococca e_gw1.3.1586.1 I 0.728
e_gw1.10.1104.1 Trichoderma atroviride e_gw1.10.1104.1 I 0.723
estExt_GeneWisePlus.C_10737 Trichoderma reesei estExt_GeneWisePlus.C_10737 I 0.723
GSTUMT00008354001 Tuber melanosporum GSTUMT00008354001 I 0.723
CHGG_05815 Chaetomium globosum CHGG_05815 I 0.723
estExt_fgenesh1_pg.C_chr_50223 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_50223 I 0.723
estExt_fgenesh1_pm.C_10552 Mycosphaerella fijiensis estExt_fgenesh1_pm.C_10552 I 0.723
SS1G_06958 Sclerotinia sclerotiorum SS1G_06958 I 0.717
BC1G_13428 Botrytis cinerea BC1G_13428 I 0.717
Pa_7_9110 Podospora anserina Pa_7_9110 I 0.712
MGG_12912 Magnaporthe oryzae MGG_12912 I 0.712
estExt_Genewise1.C_10823 Cryphonectria parasitica estExt_Genewise1.C_10823 I 0.712
SOCG_04782 Schizosaccharomyces octosporus SOCG_04782 I 0.707
SPOG_00009 Schizosaccharomyces cryophilus SPOG_00009 N 0.707
rnc1 Schizosaccharomyces pombe SPCC757.09c N 0.707
PredSwiss_CON4231.1 Pneumocystis carinii PredSwiss_CON4231.1 N 0.707
estExt_fgenesh2_kg.C_60117 Neurospora tetrasperma estExt_fgenesh2_kg.C_60117 I 0.707
estExt_fgenesh3_kg.C_50353 Neurospora discreta estExt_fgenesh3_kg.C_50353 I 0.702
PTTG_07264 Puccinia triticina PTTG_07264 N 0.702
NCU06251 Neurospora crassa NCU06251 I 0.702