estExt_fgenesh1_kg.C_690018 (Melampsora laricis populina)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 estExt_fgenesh1_kg.C_690018 T20824_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ANIA_04546
M226_0.6 		Aspergillus nidulans ACCYMA RNAcompete
Ray et al.(2013)
RNCMPT00265 		0.754
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_kg.C_690018 KH 38 100
estExt_fgenesh1_kg.C_690018 KH 127 190
estExt_fgenesh1_kg.C_690018 KH 299 362

Links

Other KH family RBPs
Other Melampsora laricis populina RBPs

66 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PGTG_14860 Puccinia graminis PGTG_14860 N 0.874
PTTG_07264 Puccinia triticina PTTG_07264 N 0.843
UM03654 Ustilago maydis UM03654 I 0.791
estExt_fgeneshMC_pm.C_50126 Mucor circinelloides estExt_fgeneshMC_pm.C_50126 I 0.785
TRV_06814 Trichophyton verrucosum TRV_06814 I 0.775
TESG_02394 Trichophyton tonsurans TESG_02394 I 0.775
EAT77860.2 Phaeosphaeria nodorum EAT77860.2 I 0.775
TEQG_01493 Trichophyton equinum TEQG_01493 I 0.775
TERG_00415 Trichophyton rubrum TERG_00415 I 0.775
MGYG_01105 Microsporum gypseum MGYG_01105 I 0.775
e_gwh1.1.1236.1 Laccaria bicolor e_gwh1.1.1236.1 I 0.775
MCYG_00862 Microsporum canis MCYG_00862 I 0.775
ARB_05593 Arthroderma benhamiae ARB_05593 I 0.775
PMAA_044720 Penicillium marneffei PMAA_044720 I 0.770
CC1G_06779 Coprinopsis cinerea CC1G_06779 I 0.770
SNOG_14668 Stagonospora nodorum SNOG_14668 I 0.770
gw1.2.1725.1 Mucor circinelloides gw1.2.1725.1 I 0.764
estExt_fgenesh2_kg.C_10919 Serpula lacrymans estExt_fgenesh2_kg.C_10919 I 0.759
MGG_12912 Magnaporthe oryzae MGG_12912 I 0.754
VDAG_06495 Verticillium dahliae VDAG_06495 I 0.754
HCAG_06295 Histoplasma capsulatum HCAG_06295 I 0.754
BDBG_04961 Blastomyces dermatitidis BDBG_04961 I 0.754
estExt_Genewise1.C_440040 Phycomyces blakesleeanus estExt_Genewise1.C_440040 I 0.754
ANIA_04546 Aspergillus nidulans CADANIAG00005892 D 0.754
PABG_02940 Paracoccidioides brasiliensis PABG_02940 I 0.754
AB04126.1 Alternaria brassicicola AB04126.1 I 0.754
estExt_fgenesh2_pm.C_10587 Agaricus bisporus estExt_fgenesh2_pm.C_10587 I 0.754
estExt_Genewise1Plus.C_41937 Myceliophthora thermophila estExt_Genewise1Plus.C_41937 I 0.754
PTRG_00277 Pyrenophora tritici repentis PTRG_00277 I 0.754
estExt_Genewise1Plus.C_11417 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_11417 I 0.754
e_gw1.10.1104.1 Trichoderma atroviride e_gw1.10.1104.1 I 0.749
CHGG_05815 Chaetomium globosum CHGG_05815 I 0.749
Pc18g04820 Penicillium chrysogenum Pc18g04820 I 0.749
fgenesh3_kg.3_#_30_#_1383_1_CCFG_CCFH Pleurotus ostreatus fgenesh3_kg.3_#_30_#_1383_1_CCFG_CCFH I 0.749
fgenesh1_pm.C_scaffold_2000184 Trichoderma virens fgenesh1_pm.C_scaffold_2000184 I 0.743
AFUA_2G02780 Aspergillus fumigatus CADAFUAG00003337 I 0.743
ACLA_092010 Aspergillus clavatus CADACLAG00008508 I 0.743
estExt_Genewise1Plus.C_560144 Postia placenta estExt_Genewise1Plus.C_560144 I 0.743
UREG_06886 Uncinocarpus reesii UREG_06886 I 0.743
estExt_Genewise1.C_31967 Thielavia terrestris estExt_Genewise1.C_31967 I 0.743
FGSG_06979 Fusarium graminearum FGSG_06979 I 0.743
NFIA_035170 Neosartorya fischeri CADNFIAG00003466 I 0.743
GSTUMT00008354001 Tuber melanosporum GSTUMT00008354001 I 0.743
BC1G_13428 Botrytis cinerea BC1G_13428 I 0.743
GLRG_03598 Colletotrichum graminicola GLRG_03598 I 0.743
FVEG_08209 Fusarium verticillioides FVEG_08209 I 0.743
estExt_fgenesh1_pm.C_11041 Schizophyllum commune estExt_fgenesh1_pm.C_11041 I 0.743
CIMG_01955 Coccidioides immitis CIMG_01955 I 0.743
e_gw1.3.1586.1 Nectria haematococca e_gw1.3.1586.1 I 0.738
AO090026000625 Aspergillus oryzae CADAORAG00008641 I 0.738
An07g07150 Aspergillus niger CADANGAG00005988 I 0.738
estExt_fgenesh3_kg.C_50353 Neurospora discreta estExt_fgenesh3_kg.C_50353 I 0.738
AFLA_133290 Aspergillus flavus CADAFLAG00007208 I 0.738
fgenesh1_pg.C_scaffold_11000272 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_11000272 I 0.738
fgenesh1_pg.00009_#_201 Aspergillus carbonarius fgenesh1_pg.00009_#_201 I 0.738
estExt_GeneWisePlus.C_10737 Trichoderma reesei estExt_GeneWisePlus.C_10737 I 0.738
estExt_Genewise1.C_10823 Cryphonectria parasitica estExt_Genewise1.C_10823 I 0.738
NCU06251 Neurospora crassa NCU06251 I 0.733
ATEG_09612 Aspergillus terreus CADATEAG00005390 I 0.733
SS1G_06958 Sclerotinia sclerotiorum SS1G_06958 I 0.733
Pa_7_9110 Podospora anserina Pa_7_9110 I 0.733
estExt_fgenesh2_kg.C_60117 Neurospora tetrasperma estExt_fgenesh2_kg.C_60117 I 0.733
estExt_fgenesh1_pm.C_10552 Mycosphaerella fijiensis estExt_fgenesh1_pm.C_10552 I 0.723
estExt_fgenesh1_pg.C_chr_50223 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_50223 I 0.717
gw1.2.632.1 Sporobolomyces roseus gw1.2.632.1 N 0.717
fgeneshTM_pg.13_#_145 Tremella mesenterica fgeneshTM_pg.13_#_145 I 0.712