SOCG_04782 (Schizosaccharomyces octosporus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 SOCG_04782 T17830_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ANIA_04546
M226_0.6 		Aspergillus nidulans ACCYMA RNAcompete
Ray et al.(2013)
RNCMPT00265 		0.702
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
SOCG_04782T0 KH 120 182
SOCG_04782T0 KH 205 268
SOCG_04782T0 KH 346 409

Links

Other KH family RBPs
Other Schizosaccharomyces octosporus RBPs

23 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SPOG_00009 Schizosaccharomyces cryophilus SPOG_00009 N 0.990
rnc1 Schizosaccharomyces pombe SPCC757.09c N 0.948
SJAG_04825 Schizosaccharomyces japonicus SJAG_04825 N 0.932
estExt_Genewise1Plus.C_560144 Postia placenta estExt_Genewise1Plus.C_560144 I 0.728
estExt_fgenesh2_kg.C_10919 Serpula lacrymans estExt_fgenesh2_kg.C_10919 I 0.728
estExt_fgeneshMC_pm.C_50126 Mucor circinelloides estExt_fgeneshMC_pm.C_50126 I 0.723
gw1.2.1725.1 Mucor circinelloides gw1.2.1725.1 I 0.723
estExt_Genewise1.C_440040 Phycomyces blakesleeanus estExt_Genewise1.C_440040 I 0.723
estExt_fgenesh2_pm.C_10587 Agaricus bisporus estExt_fgenesh2_pm.C_10587 I 0.717
fgenesh1_pg.C_scaffold_11000272 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_11000272 I 0.717
fgenesh3_kg.3_#_30_#_1383_1_CCFG_CCFH Pleurotus ostreatus fgenesh3_kg.3_#_30_#_1383_1_CCFG_CCFH I 0.707
CC1G_06779 Coprinopsis cinerea CC1G_06779 I 0.707
fgenesh1_pg.00009_#_201 Aspergillus carbonarius fgenesh1_pg.00009_#_201 I 0.702
PMAA_044720 Penicillium marneffei PMAA_044720 I 0.702
UM03654 Ustilago maydis UM03654 I 0.702
Pc18g04820 Penicillium chrysogenum Pc18g04820 I 0.702
ACLA_092010 Aspergillus clavatus CADACLAG00008508 I 0.702
ATEG_09612 Aspergillus terreus CADATEAG00005390 I 0.702
e_gwh1.1.1236.1 Laccaria bicolor e_gwh1.1.1236.1 I 0.702
ANIA_04546 Aspergillus nidulans CADANIAG00005892 D 0.702
An07g07150 Aspergillus niger CADANGAG00005988 I 0.702
AFUA_2G02780 Aspergillus fumigatus CADAFUAG00003337 I 0.702
NFIA_035170 Neosartorya fischeri CADNFIAG00003466 I 0.702