rnc1 (Schizosaccharomyces pombe)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 SPCC757.09c T20297_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
SPCC757.09c-1 KH 95 157
SPCC757.09c-1 KH 180 243
SPCC757.09c-1 KH 322 385

Links

Other KH family RBPs
Other Schizosaccharomyces pombe RBPs

15 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SJAG_04825 Schizosaccharomyces japonicus SJAG_04825 N 0.953
SOCG_04782 Schizosaccharomyces octosporus SOCG_04782 I 0.948
SPOG_00009 Schizosaccharomyces cryophilus SPOG_00009 N 0.948
estExt_Genewise1Plus.C_560144 Postia placenta estExt_Genewise1Plus.C_560144 I 0.728
estExt_fgenesh2_kg.C_10919 Serpula lacrymans estExt_fgenesh2_kg.C_10919 I 0.728
estExt_fgeneshMC_pm.C_50126 Mucor circinelloides estExt_fgeneshMC_pm.C_50126 I 0.728
fgenesh1_pg.C_scaffold_11000272 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_11000272 I 0.717
estExt_Genewise1.C_440040 Phycomyces blakesleeanus estExt_Genewise1.C_440040 I 0.717
gw1.2.1725.1 Mucor circinelloides gw1.2.1725.1 I 0.712
fgenesh3_kg.3_#_30_#_1383_1_CCFG_CCFH Pleurotus ostreatus fgenesh3_kg.3_#_30_#_1383_1_CCFG_CCFH I 0.707
estExt_fgenesh2_pm.C_10587 Agaricus bisporus estExt_fgenesh2_pm.C_10587 I 0.707
VDAG_06495 Verticillium dahliae VDAG_06495 I 0.702
UM03654 Ustilago maydis UM03654 I 0.702
estExt_fgenesh1_pm.C_11041 Schizophyllum commune estExt_fgenesh1_pm.C_11041 I 0.702
e_gwh1.1.1236.1 Laccaria bicolor e_gwh1.1.1236.1 I 0.702