CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CMF059C
(
Cyanidioschyzon merolae
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
CMF059C
T17972_0.6
Cyanidioschyzon merolae Genome Project (2008-Jan-18)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CMF059C
KH
128
177
LSRAIGRIAGTGGRTKFAIENACRVRIVLAGSKVHILGGHMQVRLARDAI
Links
Other
KH
family RBPs
Other
Cyanidioschyzon merolae
RBPs
28 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PGUG_02960
Candida guilliermondii
PGUG_02960
N
0.740
SPOG_00402
Schizosaccharomyces cryophilus
SPOG_00402
N
0.740
rbp28
Schizosaccharomyces pombe
SPAC2C4.11c
N
0.740
CTRG_05813
Candida tropicalis
CTRG_05813
N
0.720
Cd36_35296
Candida dubliniensis
Cd36_35296
N
0.720
DEHA0G05258g
Debaryomyces hansenii
DEHA0G05258g
N
0.720
CLUG_01545
Candida lusitaniae
CLUG_01545
N
0.720
SAKL0G03740g
Lachancea kluyveri
SAKL0G03740g
N
0.720
CAGL0K09460g
Candida glabrata
CAGL0K09460g
N
0.720
CPAG_01545
Candida parapsilosis
CPAG_01545
N
0.720
LELG_05249
Lodderomyces elongisporus
LELG_05249
N
0.720
estExt_genewise1_human.C_chr_1.20929
Pichia stipitis
estExt_genewise1_human.C_chr_1.20929
N
0.720
SOCG_04140
Schizosaccharomyces octosporus
SOCG_04140
N
0.720
orf19.7618
Candida albicans
orf19.7618
N
0.720
A7THL8_VANPO
Vanderwaltozyma polyspora
A7THL8_VANPO
N
0.720
ZYRO0D11440g
Zygosaccharomyces rouxii
ZYRO0D11440g
N
0.700
SJAG_03872
Schizosaccharomyces japonicus
SJAG_03872
N
0.700
KLTH0G02574g
Kluyveromyces thermotolerans
KLTH0G02574g
N
0.700
Skud_Contig1833.8
Saccharomyces kudriavzevii
Skud_Contig1833.8
N
0.700
Scas_Contig632.19
Saccharomyces castellii
Scas_Contig632.19
N
0.700
estExt_Genewise1Plus.C_10659
Myceliophthora thermophila
estExt_Genewise1Plus.C_10659
N
0.700
PNO1
Saccharomyces cerevisiae
YOR145C
N
0.700
20872_YOR145C
Saccharomyces paradoxus
20872_YOR145C
N
0.700
23888_YOR145C
Saccharomyces bayanus
23888_YOR145C
N
0.700
Kwal_18864
Kluyveromyces waltii
Kwal_18864
N
0.700
PNO1
Anolis carolinensis
ENSACAG00000001218
N
0.700
KLLA0C06446g
Kluyveromyces lactis
KLLA0C06446g
N
0.700
PNO1
Ashbya gossypii
PNO1
N
0.700