CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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DEHA0G05258g
(
Debaryomyces hansenii
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
DEHA0G05258g
T17640_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
DEHA0G05258g.1
KH
179
228
LSRAIGRIAGKDGKTKFAIENATRTRIVLADSKIHILGGFTHIRMAREAV
Links
Other
KH
family RBPs
Other
Debaryomyces hansenii
RBPs
219 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
orf19.7618
Candida albicans
orf19.7618
N
1.000
CPAG_01545
Candida parapsilosis
CPAG_01545
N
1.000
SAKL0G03740g
Lachancea kluyveri
SAKL0G03740g
N
1.000
CAGL0K09460g
Candida glabrata
CAGL0K09460g
N
1.000
CTRG_05813
Candida tropicalis
CTRG_05813
N
1.000
Cd36_35296
Candida dubliniensis
Cd36_35296
N
1.000
CLUG_01545
Candida lusitaniae
CLUG_01545
N
1.000
A7THL8_VANPO
Vanderwaltozyma polyspora
A7THL8_VANPO
N
1.000
LELG_05249
Lodderomyces elongisporus
LELG_05249
N
1.000
estExt_genewise1_human.C_chr_1.20929
Pichia stipitis
estExt_genewise1_human.C_chr_1.20929
N
1.000
PNO1
Saccharomyces cerevisiae
YOR145C
N
0.980
KLLA0C06446g
Kluyveromyces lactis
KLLA0C06446g
N
0.980
KLTH0G02574g
Kluyveromyces thermotolerans
KLTH0G02574g
N
0.980
Kwal_18864
Kluyveromyces waltii
Kwal_18864
N
0.980
PNO1
Ashbya gossypii
PNO1
N
0.980
Skud_Contig1833.8
Saccharomyces kudriavzevii
Skud_Contig1833.8
N
0.980
PGUG_02960
Candida guilliermondii
PGUG_02960
N
0.980
Scas_Contig632.19
Saccharomyces castellii
Scas_Contig632.19
N
0.980
20872_YOR145C
Saccharomyces paradoxus
20872_YOR145C
N
0.980
23888_YOR145C
Saccharomyces bayanus
23888_YOR145C
N
0.980
ZYRO0D11440g
Zygosaccharomyces rouxii
ZYRO0D11440g
N
0.980
20359_YOR145C
Saccharomyces mikatae
20359_YOR145C
N
0.961
rbp28
Schizosaccharomyces pombe
SPAC2C4.11c
N
0.860
GSTUMT00003923001
Tuber melanosporum
GSTUMT00003923001
N
0.840
estExt_fgenesh5_pg.C_40050
Trichoderma reesei
estExt_fgenesh5_pg.C_40050
N
0.840
estExt_Genewise1Plus.C_chr_70397
Mycosphaerella graminicola
estExt_Genewise1Plus.C_chr_70397
N
0.840
estExt_fgenesh1_kg.C_140013
Cochliobolus heterostrophus C5
estExt_fgenesh1_kg.C_140013
N
0.840
estExt_fgenesh1_pg.C_sca_1_chr1_3_00036
Nectria haematococca
estExt_fgenesh1_pg.C_sca_1_chr1_3_00036
N
0.840
FVEG_01480
Fusarium verticillioides
FVEG_01480
N
0.840
FOXG_00036
Fusarium oxysporum
FOXG_00036
N
0.840
estExt_Genewise1Plus.C_91132
Trichoderma virens
estExt_Genewise1Plus.C_91132
N
0.840
FGSG_01345
Fusarium graminearum
FGSG_01345
N
0.840
YALI0E01122g
Yarrowia lipolytica
YALI0E01122g
N
0.840
fgenesh1_pm.C_scaffold_14000035
Trichoderma atroviride
fgenesh1_pm.C_scaffold_14000035
N
0.840
EAT88982.1
Phaeosphaeria nodorum
EAT88982.1
N
0.820
e_gw1.3.2749.1
Cryphonectria parasitica
e_gw1.3.2749.1
N
0.820
estExt_Genewise1Plus.C_10659
Myceliophthora thermophila
estExt_Genewise1Plus.C_10659
N
0.820
PNO1
Meleagris gallopavo
ENSMGAG00000004514
N
0.820
pno1
Xenopus tropicalis
ENSXETG00000017349
N
0.820
e_gw1.3.1059.1
Mycosphaerella fijiensis
e_gw1.3.1059.1
N
0.820
PNO1_CHICK
Gallus gallus
ENSGALG00000009093
N
0.820
SNOG_03777
Stagonospora nodorum
SNOG_03777
N
0.820
SJAG_03872
Schizosaccharomyces japonicus
SJAG_03872
N
0.820
CIMG_07268
Coccidioides immitis
CIMG_07268
N
0.820
CPSG_08784
Coccidioides posadasii
CPSG_08784
N
0.820
SS1G_04290
Sclerotinia sclerotiorum
SS1G_04290
N
0.820
BC1G_12211
Botrytis cinerea
BC1G_12211
N
0.820
TESG_04215
Trichophyton tonsurans
TESG_04215
N
0.800
PNO1
Taeniopygia guttata
ENSTGUG00000002369
N
0.800
TRV_03730
Trichophyton verrucosum
TRV_03730
N
0.800
SOCG_04140
Schizosaccharomyces octosporus
SOCG_04140
N
0.800
PTTG_01898
Puccinia triticina
PTTG_01898
N
0.800
TERG_01665
Trichophyton rubrum
TERG_01665
N
0.800
SPOG_00402
Schizosaccharomyces cryophilus
SPOG_00402
N
0.800
TEQG_07954
Trichophyton equinum
TEQG_07954
N
0.800
UREG_07832
Uncinocarpus reesii
UREG_07832
N
0.800
Pc14g01220
Penicillium chrysogenum
Pc14g01220
N
0.800
MGYG_04767
Microsporum gypseum
MGYG_04767
N
0.800
PNO1
Anolis carolinensis
ENSACAG00000001218
N
0.800
MCYG_07269
Microsporum canis
MCYG_07269
N
0.800
ARB_00984
Arthroderma benhamiae
ARB_00984
N
0.800
estExt_Genewise1.C_10689
Thielavia terrestris
estExt_Genewise1.C_10689
N
0.800
HCAG_04100
Histoplasma capsulatum
HCAG_04100
N
0.800
Ame_R013855
Ailuropoda melanoleuca
Ame_R013855
N
0.780
e_gw1.3.666.1
Neurospora discreta
e_gw1.3.666.1
N
0.780
AAH42279
Xenopus laevis
AAH42279
N
0.780
e_gww2.1.865.1
Phanerochaete chrysosporium
e_gww2.1.865.1
N
0.780
PNO1
Tursiops truncatus
ENSTTRG00000014002
N
0.780
PNO1
Vicugna pacos
ENSVPAG00000012083
N
0.780
AAQ24169
Xenopus laevis
AAQ24169
N
0.780
fgeneshTA2_pg.C_scaffold_14000176
Trichoplax adhaerens
fgeneshTA2_pg.C_scaffold_14000176
N
0.780
PNO1
Sus scrofa
ENSSSCG00000008352
N
0.780
Chlre2_kg.scaffold_20000177
Chlamydomonas reinhardtii
Chlre2_kg.scaffold_20000177
N
0.780
RO3G_00885
Rhizopus oryzae
RO3G_00885
N
0.780
estExt_Genewise1Plus.C_600117
Volvox carteri
estExt_Genewise1Plus.C_600117
N
0.780
RO3G_05288
Rhizopus oryzae
RO3G_05288
N
0.780
PABG_01374
Paracoccidioides brasiliensis
PABG_01374
N
0.780
fgenesh3_pm.54__15
Postia placenta
fgenesh3_pm.54__15
N
0.780
NCU07956
Neurospora crassa
NCU07956
N
0.780
estExt_Genewise1Plus.C_430054
Neurospora tetrasperma
estExt_Genewise1Plus.C_430054
N
0.780
PTRG_02803
Pyrenophora tritici repentis
PTRG_02803
N
0.780
Pno1
Rattus norvegicus
ENSRNOG00000005524
N
0.780
PNO1
Loxodonta africana
ENSLAFG00000000046
N
0.780
PNO1
Gorilla gorilla
ENSGGOG00000009158
N
0.780
AMAG_14219
Allomyces macrogynus
AMAG_14219
N
0.780
PNO1
Macropus eugenii
ENSMEUG00000004504
N
0.780
PNO1_BOVIN
Bos taurus
ENSBTAG00000010604
N
0.780
PNO1
Microcebus murinus
ENSMICG00000010897
N
0.780
PNO1
Homo sapiens
ENSG00000115946
N
0.780
PNO1
Erinaceus europaeus
ENSEEUG00000009611
N
0.780
BDBG_01721
Blastomyces dermatitidis
BDBG_01721
N
0.780
LOC100389955
Callithrix jacchus
ENSCJAG00000006564
N
0.780
PNO1
Cavia porcellus
ENSCPOG00000010130
N
0.780
pno1
Danio rerio
ENSDARG00000008502
N
0.780
LOC100061904
Equus caballus
ENSECAG00000011263
N
0.780
Pno1
Dipodomys ordii
ENSDORG00000006867
N
0.780
PNO1
Myotis lucifugus
ENSMLUG00000010850
N
0.780
Q8AVH4
Xenopus laevis
Q8AVH4
N
0.780
Q6VBQ6_ORYLA
Oryzias latipes
ENSORLG00000002371
N
0.780
PNO1
Ochotona princeps
ENSOPRG00000009643
N
0.780
PNO1
Procavia capensis
ENSPCAG00000016146
N
0.780
ENSPPYG00000012353
Pongo pygmaeus
ENSPPYG00000012353
N
0.780
PNO1
Pteropus vampyrus
ENSPVAG00000012695
N
0.780
PNO1
Pan troglodytes
ENSPTRG00000011999
N
0.780
ENSOCUG00000022236
Oryctolagus cuniculus
ENSOCUG00000022236
N
0.780
ENSOCUG00000006100
Oryctolagus cuniculus
ENSOCUG00000006100
N
0.780
XM_001095777.1
Macaca mulatta
ENSMMUG00000030357
N
0.780
Q7YRC8_MACMU
Macaca mulatta
ENSMMUG00000017461
N
0.780
PNO1
Monodelphis domestica
ENSMODG00000003567
N
0.780
AMAG_12889
Allomyces macrogynus
AMAG_12889
N
0.780
PNO1
Ornithorhynchus anatinus
ENSOANG00000008388
N
0.780
PNO1
Canis familiaris
ENSCAFG00000003256
N
0.780
AO090003000014
Aspergillus oryzae
CADAORAG00000701
N
0.765
AFLA_037860
Aspergillus flavus
CADAFLAG00003159
N
0.765
e_gw1.12.287.1
Serpula lacrymans
e_gw1.12.287.1
N
0.760
estExt_Genewise1.C_260084
Melampsora laricis populina
estExt_Genewise1.C_260084
N
0.760
fgenesh1_kg.C_scaffold_5000048
Selaginella moellendorfii
fgenesh1_kg.C_scaffold_5000048
N
0.760
gw1.1.2472.1
Pleurotus ostreatus
gw1.1.2472.1
N
0.760
fgenesh1_pm.C_scaffold_5000030
Phytophthora ramorum
fgenesh1_pm.C_scaffold_5000030
N
0.760
s_468317
Phytophthora sojae
s_468317
N
0.760
estExt_Genewise1Plus.C_10658
Mucor circinelloides
estExt_Genewise1Plus.C_10658
N
0.760
EDP42908.1
Malassezia globosa
EDP42908.1
N
0.760
PNO1
Takifugu rubripes
ENSTRUG00000012470
N
0.760
XP_791733.2
Strongylocentrotus purpuratus
XP_791733.2
N
0.760
XP_002162789.1
Hydra magnipapillata
XP_002162789.1
N
0.760
XP_001202160.1
Strongylocentrotus purpuratus
XP_001202160.1
N
0.760
PNO1
Tetraodon nigroviridis
ENSTNIG00000009825
N
0.760
Pno1
Mus musculus
ENSMUSG00000020116
N
0.760
MGG_05136
Magnaporthe oryzae
MGG_05136
N
0.760
PITG_01680
Phytophthora infestans
PITG_01680
N
0.760
SPRG_02415
Saprolegnia parasitica
SPRG_02415
N
0.760
XP_001202155.1
Strongylocentrotus purpuratus
XP_001202155.1
N
0.760
XP_798188.2
Strongylocentrotus purpuratus
XP_798188.2
N
0.760
e_gw1.8.261.1
Sporobolomyces roseus
e_gw1.8.261.1
N
0.760
e_gw1.2.2126.1
Schizophyllum commune
e_gw1.2.2126.1
N
0.760
GLRG_03940
Colletotrichum graminicola
GLRG_03940
N
0.750
PMAA_046470
Penicillium marneffei
PMAA_046470
N
0.740
ENSCJAG00000022611
Callithrix jacchus
ENSCJAG00000022611
N
0.740
e_gw1.2.756.1
Heterobasidion annosum
e_gw1.2.756.1
N
0.740
ATEG_07413
Aspergillus terreus
CADATEAG00001505
N
0.740
PNO1
Gasterosteus aculeatus
ENSGACG00000012047
N
0.740
ANIA_05785
Aspergillus nidulans
CADANIAG00003265
N
0.740
Bm1_42995
Brugia malayi
Bm1_42995
N
0.740
WUBG_12774
Wuchereria bancrofti
WUBG_12774
N
0.740
3712.m00082
Tetrahymena thermophila
3712.m00082
N
0.740
e_gwh1.2.512.1
Laccaria bicolor
e_gwh1.2.512.1
N
0.740
UM03495
Ustilago maydis
UM03495
N
0.740
estExt_fgenesh1_pg.C_110137
Monosiga brevicollis
estExt_fgenesh1_pg.C_110137
N
0.740
fgenesh2_pm.scaffold_78000001
Branchiostoma floridae
fgenesh2_pm.scaffold_78000001
N
0.740
fgenesh2_pg.scaffold_196000015
Branchiostoma floridae
fgenesh2_pg.scaffold_196000015
N
0.740
PDK_20s1554761g001
Phoenix dactylifera
PDK_20s1554761g001
N
0.740
PHUM356890
Pediculus humanus
PHUM356890
N
0.740
LOAG_05624
Loa loa
LOAG_05624
N
0.740
fgenesh_newKGs_pm.139__21
Emiliania huxleyi
fgenesh_newKGs_pm.139__21
N
0.740
amel4_ncbi_hmm14037
Apis mellifera
amel4_ncbi_hmm14037
N
0.740
estExt_fgenesh2_kg.C_20130
Agaricus bisporus
estExt_fgenesh2_kg.C_20130
N
0.740
estExt_Genewise1Plus.C_250095
Phycomyces blakesleeanus
estExt_Genewise1Plus.C_250095
N
0.740
estExt_fgenesh1_pg.C_190237
Phytophthora capsici
estExt_fgenesh1_pg.C_190237
N
0.740
MDP0000136407
Malus x domestica
MDP0000136407
N
0.720
GSPATP00021981001
Paramecium tetraurelia
GSPATP00021981001
N
0.720
Pa_3_1680
Podospora anserina
Pa_3_1680
N
0.720
MDP0000120063
Malus x domestica
MDP0000120063
N
0.720
ppa011086m
Prunus persica
ppa011086m
N
0.720
ppa009897m
Prunus persica
ppa009897m
N
0.720
LjSGA_017760.2
Lotus japonicus
LjSGA_017760.2
N
0.720
MDP0000265633
Malus x domestica
MDP0000265633
N
0.720
AMSG_02733
Thecamonas trahens
AMSG_02733
N
0.720
Genemark1.5719_g
Coccomyxa C 169
Genemark1.5719_g
N
0.720
GSPATP00020703001
Paramecium tetraurelia
GSPATP00020703001
N
0.720
MDP0000754021
Malus x domestica
MDP0000754021
N
0.720
fgeneshCV_pg.C_scaffold_11000142
Chlorella vulgaris
fgeneshCV_pg.C_scaffold_11000142
N
0.720
Cucsa.041830
Cucumis sativus
Cucsa.041830
N
0.720
28525.m000262
Ricinus communis
28525.m000262
N
0.720
e_gw1.15.315.1
Tremella mesenterica
e_gw1.15.315.1
N
0.720
cassava30594.valid.m1
Manihot esculenta
cassava30594.valid.m1
N
0.720
Cucsa.201760
Cucumis sativus
Cucsa.201760
N
0.720
e_gw1.226.39.1
Physcomitrella patens
e_gw1.226.39.1
N
0.720
B9GHH7_POPTR
Populus trichocarpa
POPTR_0001s47320
N
0.720
XM_001110046.1
Macaca mulatta
ENSMMUG00000003556
N
0.720
SPPG_04498
Spizellomyces punctatus
SPPG_04498
N
0.720
PTSG_04415
Salpingoeca rosetta
PTSG_04415
N
0.720
PK08146.1
Cannabis sativa
PK08146.1
N
0.720
CMF059C
Cyanidioschyzon merolae
CMF059C
N
0.720
ACLA_088200
Aspergillus clavatus
CADACLAG00008695
N
0.720
estExt_Genewise1.C_5820041
Capitella teleta
estExt_Genewise1.C_5820041
N
0.720
B9N5M8_POPTR
Populus trichocarpa
POPTR_0011s16880
N
0.720
BGIBMGA014064
Bombyx mori
BGIBMGA014064
N
0.720
EFA79428.1
Polysphondylium pallidum
EFA79428.1
N
0.720
fgenesh1_pg.scaffold_18000119
Nematostella vectensis
fgenesh1_pg.scaffold_18000119
N
0.720
GM23025
Drosophila sechellia
FBgn0177893
N
0.706
GF20246
Drosophila ananassae
FBgn0097253
N
0.706
l(1)G0004
Drosophila melanogaster
FBgn0027334
N
0.706
GD17488
Drosophila simulans
FBgn0189040
N
0.706
GE17874
Drosophila yakuba
FBgn0068478
N
0.706
GG19285
Drosophila erecta
FBgn0111489
N
0.706
BRADI2G52180
Brachypodium distachyon
BRADI2G52180
N
0.700
BGIOSIBCE009391
Oryza indica
BGIOSIBCE009391
N
0.700
GRMZM2G085005
Zea mays
GRMZM2G085005
N
0.700
AFUA_6G06430
Aspergillus fumigatus
CADAFUAG00001979
N
0.700
NFIA_052070
Neosartorya fischeri
CADNFIAG00004473
N
0.700
nasonia_NCBI_hmm120183
Nasonia vitripennis
nasonia_NCBI_hmm120183
N
0.700
DGIL_AUG5s4501g8t1
Acyrtosiphon pisum
DGIL_AUG5s4501g8t1
N
0.700
EDO07242.1
Babesia bovis
EDO07242.1
N
0.700
e_gw1.13.100.1
Volvox carteri
e_gw1.13.100.1
N
0.700
GID1.0042265
Dictyostelium purpureum
GID1.0042265
N
0.700
GRMZM2G139198
Zea mays
GRMZM2G139198
N
0.700
pno1
Dictyostelium discoideum
DDB_G0287557
N
0.700
mgf006621m
Mimulus guttatus
mgf006621m
N
0.700
LOC_Os01g57910
Oryza sativa
LOC_Os01g57910
N
0.700
LOC_Os03g02420
Oryza sativa
LOC_Os03g02420
N
0.700
PHATRDRAFT_9929
Phaeodactylum tricornutum
Phatr9929
N
0.700
GP3.070330
Batrachochytrium dendrobatidis
GP3.070330
N
0.700
SB03G036840
Sorghum bicolor
Sb03g036840
N
0.700
Glyma18g08080.1
Glycine max
Glyma18g08080.1
N
0.700
PDK_20s1552091g001
Phoenix dactylifera
PDK_20s1552091g001
N
0.700
cassava7030.valid.m1
Manihot esculenta
cassava7030.valid.m1
N
0.700
Glyma08g44800.1
Glycine max
Glyma08g44800.1
N
0.700
estExt_fgenesh2_pm.C_sca_70005
Lottia gigantea
estExt_fgenesh2_pm.C_sca_70005
N
0.700
Glyma18g08100.1
Glycine max
Glyma18g08100.1
N
0.700