CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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XR_030450.1
(
Monodelphis domestica
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSMODG00000016543
T19101_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMODP00000033351
KH
42
102
ELTIPNDLIGYIIGCQGAKINEIRQISGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI
ENSMODP00000033352
KH
77
137
ELTIPNDLIGYIIGCQGAKINEIRQISGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI
Links
Other
KH
family RBPs
Other
Monodelphis domestica
RBPs
10 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PCBP2
Sus scrofa
ENSSSCG00000000274
I
0.921
ENSMODG00000017748
Monodelphis domestica
ENSMODG00000017748
I
0.921
PCBP1
Tarsius syrichta
ENSTSYG00000011282
N
0.857
PCBP1
Tupaia belangeri
ENSTBEG00000015706
N
0.857
ENSMGAG00000005386
Meleagris gallopavo
ENSMGAG00000005386
N
0.852
ENSOCUG00000025545
Oryctolagus cuniculus
ENSOCUG00000025545
N
0.794
PCBP3
Homo sapiens
ENSG00000183570
I
0.778
LOC100408015
Callithrix jacchus
ENSCJAG00000001903
I
0.778
PCBP1
Macaca mulatta
ENSMMUG00000013756
N
0.746