CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PCBP1
(
Tarsius syrichta
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSTSYG00000011282
T19687_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTSYP00000010321
KH
110
172
THELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLI
Links
Other
KH
family RBPs
Other
Tarsius syrichta
RBPs
9 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PCBP1
Tupaia belangeri
ENSTBEG00000015706
N
1.000
PCBP2
Sus scrofa
ENSSSCG00000000274
I
0.921
ENSMODG00000017748
Monodelphis domestica
ENSMODG00000017748
I
0.905
XR_030450.1
Monodelphis domestica
ENSMODG00000016543
N
0.857
LOC100408015
Callithrix jacchus
ENSCJAG00000001903
I
0.841
PCBP1
Macaca mulatta
ENSMMUG00000013756
N
0.841
PCBP3
Homo sapiens
ENSG00000183570
I
0.841
ENSOCUG00000025545
Oryctolagus cuniculus
ENSOCUG00000025545
N
0.825
ENSMGAG00000005386
Meleagris gallopavo
ENSMGAG00000005386
N
0.825