CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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NCLIV_012590
(
Neospora caninum
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
NCLIV_012590
T20412_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
NCLIV_012590
KH
219
267
SRCIARLNGRDGKTKYAIENATRTRLVFADSRIHILGSFENIKLARHSI
Links
Other
KH
family RBPs
Other
Neospora caninum
RBPs
22 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TGME49_020490
Toxoplasma gondii
TGME49_020490
N
0.980
TGGT1_015210
Toxoplasma gondii
TGGT1_015210
N
0.980
TGVEG_087040
Toxoplasma gondii
TGVEG_087040
N
0.980
SPRG_02415
Saprolegnia parasitica
SPRG_02415
N
0.740
s_468317
Phytophthora sojae
s_468317
N
0.720
estExt_fgenesh1_pg.C_190237
Phytophthora capsici
estExt_fgenesh1_pg.C_190237
N
0.720
fgenesh1_pm.C_scaffold_5000030
Phytophthora ramorum
fgenesh1_pm.C_scaffold_5000030
N
0.720
PITG_01680
Phytophthora infestans
PITG_01680
N
0.720
e_gw1.18.222.1
Chlorella NC64A
e_gw1.18.222.1
N
0.714
BGIOSIBCE009391
Oryza indica
BGIOSIBCE009391
N
0.700
LOC_Os03g02420
Oryza sativa
LOC_Os03g02420
N
0.700
SB03G036840
Sorghum bicolor
Sb03g036840
N
0.700
LOC_Os01g57910
Oryza sativa
LOC_Os01g57910
N
0.700
BRADI2G52180
Brachypodium distachyon
BRADI2G52180
N
0.700
GRMZM2G139198
Zea mays
GRMZM2G139198
N
0.700
estExt_Genewise1Plus.C_600117
Volvox carteri
estExt_Genewise1Plus.C_600117
N
0.700
Chlre2_kg.scaffold_20000177
Chlamydomonas reinhardtii
Chlre2_kg.scaffold_20000177
N
0.700
GRMZM2G085005
Zea mays
GRMZM2G085005
N
0.700
PF14_0661
Plasmodium falciparum
PF14_0661
N
0.700
GSPATP00020703001
Paramecium tetraurelia
GSPATP00020703001
N
0.700
EDO07242.1
Babesia bovis
EDO07242.1
N
0.700
GSPATP00021981001
Paramecium tetraurelia
GSPATP00021981001
N
0.700