cassava13307.valid.m1 (Manihot esculenta)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 cassava13307.valid.m1 T20647_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
cassava13307.valid.m1 KH 144 200

Links

Other KH family RBPs
Other Manihot esculenta RBPs

15 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
cassava13306.valid.m1 Manihot esculenta cassava13306.valid.m1 N 1.000
Medtr2g005410 Medicago truncatula Medtr2g005410 N 0.831
GRMZM2G125531 Zea mays GRMZM2G125531 N 0.817
Cucsa.114230 Cucumis sativus Cucsa.114230 N 0.807
GSVIVG00023231001 Vitis vinifera GSVIVG00023231001 N 0.803
cassava13904.valid.m1 Manihot esculenta cassava13904.valid.m1 N 0.800
BGIOSIBCE004530 Oryza indica BGIOSIBCE004530 N 0.800
LOC_Os01g66300 Oryza sativa LOC_Os01g66300 N 0.800
SB03G042090 Sorghum bicolor Sb03g042090 N 0.797
BRADI2G57220 Brachypodium distachyon BRADI2G57220 N 0.738
AT1G09660 Arabidopsis thaliana AT1G09660-TAIR-G N 0.733
XM_002892469.1 Arabidopsis lyrata fgenesh2_kg.1__1021__AT1G09660.1 N 0.733
BGIOSIBCE019075 Oryza indica BGIOSIBCE019075 N 0.723
LOC_Os05g34670 Oryza sativa LOC_Os05g34670 N 0.723
e_gw1.23.297.1 Selaginella moellendorfii e_gw1.23.297.1 N 0.719