CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
estExt_fgenesh1_pg.C_670017
(
Neurospora tetrasperma
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
estExt_fgenesh1_pg.C_670017
T20845_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pg.C_670017
KH
257
330
DAVQIDLSVQPLLCGRNRKNIKHIESATNTAIYFPPCFSHAYGYCPPGALRRNPDEVFITGETPEAISQAKTRI
estExt_fgenesh1_pg.C_670017
KH
434
468
LSDVCANSDADIAFDKIAFTLTGSDEAVKEALQVL
estExt_fgenesh1_pg.C_670017
KH
481
538
IRVKIELANEHKEFVSGKKNGKINKIMSHCNVQIVFDNFGEYNFNIDVLAHNYTSMKE
estExt_fgenesh1_pg.C_670017
KH
550
620
SISFHVPDQYHKRIIGIGGQHIQRIMKKHSVFVKFSNAMDRGGMGRDDDDSRVDNVICRTPARNAQNLELV
estExt_fgenesh1_pg.C_670017
KH
656
692
EIEVLEKKYNCKISFPSTEQASDEVTVQGPQWQVPMC
Links
Other
KH
family RBPs
Other
Neurospora tetrasperma
RBPs
7 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
estExt_fgenesh2_pg.C_120096
Neurospora discreta
estExt_fgenesh2_pg.C_120096
N
0.996
NCU05266
Neurospora crassa
NCU05266
N
0.996
e_gw1.1.3735.1
Myceliophthora thermophila
e_gw1.1.3735.1
N
0.730
Pa_3_4120
Podospora anserina
Pa_3_4120
N
0.727
FOXG_08528
Fusarium oxysporum
FOXG_08528
N
0.707
FVEG_06144
Fusarium verticillioides
FVEG_06144
N
0.707
FGSG_06181
Fusarium graminearum
FGSG_06181
N
0.706