CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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IGF2BP1
(
Dasypus novemcinctus
)
KH,RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
PF00076 (RRM_1)
IPR018111
IPR000504
ENSDNOG00000006801
T22194_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDNOP00000005283
RRM
4
69
LYIGNLNESVTPADLEKVFAEHKISYSGQFLVKSGYAFVDCPDEHWAMKAIETFSGKVELQGKRLE
ENSDNOP00000005283
RRM
83
150
IQIRNIPPQLRWEVLDSLLAQYGTVENCEQVNTESETAVVNVTYSNREQTRQAIMKLNGHQLENHALK
ENSDNOP00000005283
KH
197
260
PLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCSSACKMI
ENSDNOP00000005283
KH
407
445
MVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKXXXXX
ENSDNOP00000005283
KH
489
547
ETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTPDENDQVIVKIIGHFYASQ
Links
Other
KH,RRM
family RBPs
Other
Dasypus novemcinctus
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
IGF2BP1
Procavia capensis
ENSPCAG00000016601
N
0.869
LOC100395821
Callithrix jacchus
ENSCJAG00000007258
I
0.705
IGF2BP1
Homo sapiens
ENSG00000159217
D
0.705