CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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IGF2BP1
(
Procavia capensis
)
KH,RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
PF00076 (RRM_1)
IPR018111
IPR000504
ENSPCAG00000016601
T22256_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPCAP00000015550
RRM
4
69
LYIGNLNESVTPADLEKVFAEHKISYSGPFLVKSGYAFVDCPDEHWAMKAIETFSGKVELQGKRLE
ENSPCAP00000015550
RRM
83
150
IQIRNIPPQLRWEVLDSLLAQYGTVENCEQVNTESETAVVNVTYSNREQTRQAIMKLNGHQLENHALK
ENSPCAP00000015550
KH
197
260
PLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCSSACKMI
ENSPCAP00000015550
KH
407
467
VQVFIPAQAVGAIIGKGQHIQLSRFASASIKIAPPETPDSIVRMVIITGPPEAQFKAQGRI
ENSPCAP00000015550
KH
486
550
ETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTPDENDQVIVKIIGHFYASQMAQRKI
Links
Other
KH,RRM
family RBPs
Other
Procavia capensis
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
IGF2BP1
Dasypus novemcinctus
ENSDNOG00000006801
N
0.869
IGF2BP1
Homo sapiens
ENSG00000159217
D
0.790
LOC100395821
Callithrix jacchus
ENSCJAG00000007258
I
0.790
IGF2BP1
Tupaia belangeri
ENSTBEG00000004254
N
0.703