CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
ENSCING00000008613
(
Ciona intestinalis
)
La
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
IPR006630
ENSCING00000008613
T22703_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCINP00000017569
La
67
127
IRTLLEHYFSDANLTKDKFLLKHVKRNKLGYVSVKLLTSFKKLKNLSKSDWRITAYCLSQS
Links
Other
La
family RBPs
Other
Ciona intestinalis
RBPs
2 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSCSAVG00000011718
Ciona savignyi
ENSCSAVG00000011718
N
0.918
SNAPOd2T00012503001
Oikopleura dioica
SNAPOd2T00012503001
N
0.754