CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSCSAVG00000011718
(
Ciona savignyi
)
La
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
IPR006630
ENSCSAVG00000011718
T22719_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCSAVP00000019977
La
64
124
IRSLLEHYFSDANLIKDKFLLKHVKRNKLGYVSVKLLTSFKKVKNLSKSDWRITAYSLSKS
Links
Other
La
family RBPs
Other
Ciona savignyi
RBPs
6 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSCING00000008613
Ciona intestinalis
ENSCING00000008613
N
0.918
SNAPOd2T00012503001
Oikopleura dioica
SNAPOd2T00012503001
N
0.738
LARP6
Cavia porcellus
ENSCPOG00000022687
N
0.705
LARP6
Procavia capensis
ENSPCAG00000014197
N
0.705
LARP6
Loxodonta africana
ENSLAFG00000016343
N
0.705
LARP6
Echinops telfairi
ENSETEG00000020390
N
0.705