SNAPOd2T00012503001 (Oikopleura dioica)
La

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF05383 (La) IPR006630 SNAPOd2T00012503001 T22989_0.6 Genoscope (2013-Jan-11)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
SNAPOd2T00012503001 La 92 151

Links

Other La family RBPs
Other Oikopleura dioica RBPs

16 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSCING00000008613 Ciona intestinalis ENSCING00000008613 N 0.754
LARP6 Macropus eugenii ENSMEUG00000002270 N 0.738
LARP6 Monodelphis domestica ENSMODG00000009034 N 0.738
ENSCSAVG00000011718 Ciona savignyi ENSCSAVG00000011718 N 0.738
LARP6 Echinops telfairi ENSETEG00000020390 N 0.738
Larp6 Rattus norvegicus ENSRNOG00000012438 N 0.721
Larp6 Mus musculus ENSMUSG00000034839 N 0.721
LARP6 Choloepus hoffmanni ENSCHOG00000003318 N 0.721
LARP6 Loxodonta africana ENSLAFG00000016343 N 0.721
LARP6 Procavia capensis ENSPCAG00000014197 N 0.721
Ame_R010574 Ailuropoda melanoleuca Ame_R010574 N 0.721
LARP6 Cavia porcellus ENSCPOG00000022687 N 0.721
LARP6 Taeniopygia guttata ENSTGUG00000005808 N 0.705
LARP6 Gallus gallus ENSGALG00000004046 N 0.705
LARP6 Anolis carolinensis ENSACAG00000008613 N 0.705
LARP6 Meleagris gallopavo ENSMGAG00000005077 N 0.705