CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GA14498-RA
(
Drosophila pseudoobscura
)
La
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
IPR006630
FBgn0074526
T22896_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0276856
La
285
344
ITDAVEFYFSNESILKDAFLLKHVRRNKEGYVSLKLVSSFKRVRQLTREWKTVGDAVRRK
Links
Other
La
family RBPs
Other
Drosophila pseudoobscura
RBPs
12 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GL10694
Drosophila persimilis
FBgn0148304
N
1.000
GD11054
Drosophila simulans
FBgn0182814
N
0.967
CG17386
Drosophila melanogaster
FBgn0033936
N
0.967
GM21546
Drosophila sechellia
FBgn0176426
N
0.967
GE13588
Drosophila yakuba
FBgn0231250
N
0.950
GG20457
Drosophila erecta
FBgn0112647
N
0.950
GI20285
Drosophila mojavensis
FBgn0143021
N
0.933
GJ22012
Drosophila virilis
FBgn0209126
N
0.933
GF13506
Drosophila ananassae
FBgn0090535
N
0.933
GH19749
Drosophila grimshawi
FBgn0127213
N
0.933
GK21479
Drosophila willistoni
FBgn0223471
N
0.900
amel4_ncbi_hmm2546
Apis mellifera
amel4_ncbi_hmm2546
N
0.717