CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
amel4_ncbi_hmm2546
(
Apis mellifera
)
La
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
IPR006630
amel4_ncbi_hmm2546
T22640_0.6
DroSpeGe (2008-Jul-18)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
amel4_ncbi_hmm2546
La
124
183
ICAQVEFYFSDENIVKDAFLLKHVRRNKEGYVSLKLISSFKRVKHLSRDWRVVGAALARS
Links
Other
La
family RBPs
Other
Apis mellifera
RBPs
28 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
BGIBMGA013975
Bombyx mori
BGIBMGA013975
N
0.850
DGIL_AUG5s14155g1t1
Acyrtosiphon pisum
DGIL_AUG5s14155g1t1
N
0.833
GI20285
Drosophila mojavensis
FBgn0143021
N
0.717
GH19749
Drosophila grimshawi
FBgn0127213
N
0.717
GG20457
Drosophila erecta
FBgn0112647
N
0.717
GL10694
Drosophila persimilis
FBgn0148304
N
0.717
CG17386
Drosophila melanogaster
FBgn0033936
N
0.717
GM21546
Drosophila sechellia
FBgn0176426
N
0.717
GE13588
Drosophila yakuba
FBgn0231250
N
0.717
GA14498-RA
Drosophila pseudoobscura
FBgn0074526
N
0.717
GK21479
Drosophila willistoni
FBgn0223471
N
0.717
GD11054
Drosophila simulans
FBgn0182814
N
0.717
GJ22012
Drosophila virilis
FBgn0209126
N
0.717
Ame_R010574
Ailuropoda melanoleuca
Ame_R010574
N
0.700
GF13506
Drosophila ananassae
FBgn0090535
N
0.700
LARP6
Taeniopygia guttata
ENSTGUG00000005808
N
0.700
LARP6
Echinops telfairi
ENSETEG00000020390
N
0.700
LARP6
Gallus gallus
ENSGALG00000004046
N
0.700
LARP6
Cavia porcellus
ENSCPOG00000022687
N
0.700
LARP6
Choloepus hoffmanni
ENSCHOG00000003318
N
0.700
LARP6
Anolis carolinensis
ENSACAG00000008613
N
0.700
LARP6
Loxodonta africana
ENSLAFG00000016343
N
0.700
LARP6
Macropus eugenii
ENSMEUG00000002270
N
0.700
LARP6
Procavia capensis
ENSPCAG00000014197
N
0.700
Larp6
Mus musculus
ENSMUSG00000034839
N
0.700
LARP6
Monodelphis domestica
ENSMODG00000009034
N
0.700
LARP6
Meleagris gallopavo
ENSMGAG00000005077
N
0.700
Larp6
Rattus norvegicus
ENSRNOG00000012438
N
0.700