CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
GE13588
(
Drosophila yakuba
)
La
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
IPR006630
FBgn0231250
T22926_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0258598
La
285
344
ITEAVEFYFSNESILKDAFLLKHVRRNKEGFVSLKLVSSFKRVRQLTREWKVVGDAVRRK
Links
Other
La
family RBPs
Other
Drosophila yakuba
RBPs
12 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GG20457
Drosophila erecta
FBgn0112647
N
1.000
GJ22012
Drosophila virilis
FBgn0209126
N
0.983
GD11054
Drosophila simulans
FBgn0182814
N
0.983
GF13506
Drosophila ananassae
FBgn0090535
N
0.983
GM21546
Drosophila sechellia
FBgn0176426
N
0.983
CG17386
Drosophila melanogaster
FBgn0033936
N
0.983
GK21479
Drosophila willistoni
FBgn0223471
N
0.950
GH19749
Drosophila grimshawi
FBgn0127213
N
0.950
GA14498-RA
Drosophila pseudoobscura
FBgn0074526
N
0.950
GI20285
Drosophila mojavensis
FBgn0143021
N
0.950
GL10694
Drosophila persimilis
FBgn0148304
N
0.950
amel4_ncbi_hmm2546
Apis mellifera
amel4_ncbi_hmm2546
N
0.717