CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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BGIBMGA013975
(
Bombyx mori
)
La
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
IPR006630
BGIBMGA013975
T23117_0.6
SilkDB (2008-Apr-11)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIBMGA013975
La
70
129
IVSQVEFYFSDANITKDAFLLKHVRRNKEGYVSLKLISSFKRVKHLTKDWRVVAEALKRS
Links
Other
La
family RBPs
Other
Bombyx mori
RBPs
22 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
DGIL_AUG5s14155g1t1
Acyrtosiphon pisum
DGIL_AUG5s14155g1t1
N
0.867
amel4_ncbi_hmm2546
Apis mellifera
amel4_ncbi_hmm2546
N
0.850
estExt_fgenesh1_pg.C_280101
Nematostella vectensis
estExt_fgenesh1_pg.C_280101
N
0.783
estExt_fgenesh2_pg.C_1930052
Branchiostoma floridae
estExt_fgenesh2_pg.C_1930052
N
0.750
Larp6
Mus musculus
ENSMUSG00000034839
N
0.733
LARP6
Monodelphis domestica
ENSMODG00000009034
N
0.733
LARP6
Procavia capensis
ENSPCAG00000014197
N
0.733
Larp6
Rattus norvegicus
ENSRNOG00000012438
N
0.733
PASA_GEN_13200011
Daphnia pulex
PASA_GEN_13200011
N
0.733
Ame_R010574
Ailuropoda melanoleuca
Ame_R010574
N
0.733
LARP6
Macropus eugenii
ENSMEUG00000002270
N
0.733
LARP6
Echinops telfairi
ENSETEG00000020390
N
0.733
LARP6
Cavia porcellus
ENSCPOG00000022687
N
0.733
LARP6
Loxodonta africana
ENSLAFG00000016343
N
0.733
LARP6
Choloepus hoffmanni
ENSCHOG00000003318
N
0.733
ISCW016164
Ixodes scapularis
ISCW016164
N
0.717
LARP6
Anolis carolinensis
ENSACAG00000008613
N
0.700
LARP6
Taeniopygia guttata
ENSTGUG00000005808
N
0.700
LARP6
Gallus gallus
ENSGALG00000004046
N
0.700
Larp6
Dipodomys ordii
ENSDORG00000012663
N
0.700
LARP6
Meleagris gallopavo
ENSMGAG00000005077
N
0.700
GK21479
Drosophila willistoni
FBgn0223471
N
0.700