XM_002885119.1 (Arabidopsis lyrata)
PUF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00806 (PUF) IPR001313 Al_scaffold_0003_1757 T24006_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Al_scaffold_0003_1757 PUF 106 140
Al_scaffold_0003_1757 PUF 142 172

Links

Other PUF family RBPs
Other Arabidopsis lyrata RBPs

5 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Al_scaffold_0769_1 Arabidopsis lyrata Al_scaffold_0769_1 N 0.985
ppa002599m Prunus persica ppa002599m N 0.776
Glyma17g03290.1 Glycine max Glyma17g03290.1 N 0.731
B9N014_POPTR Populus trichocarpa POPTR_0008s23200 N 0.714
Cucsa.069370 Cucumis sativus Cucsa.069370 N 0.712