B9N014_POPTR (Populus trichocarpa)
PUF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00806 (PUF) IPR001313 POPTR_0008s23200 T24427_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0008s23200.1 PUF 128 162
POPTR_0008s23200.1 PUF 164 198

Links

Other PUF family RBPs
Other Populus trichocarpa RBPs

7 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
B9HXE2_POPTR Populus trichocarpa POPTR_0010s00780 N 0.929
29726.m004103 Ricinus communis 29726.m004103 N 0.929
ppa002599m Prunus persica ppa002599m N 0.829
Glyma17g03290.1 Glycine max Glyma17g03290.1 N 0.786
Cucsa.069370 Cucumis sativus Cucsa.069370 N 0.786
Al_scaffold_0769_1 Arabidopsis lyrata Al_scaffold_0769_1 N 0.729
XM_002885119.1 Arabidopsis lyrata Al_scaffold_0003_1757 N 0.714