CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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KLLA0E13685g
(
Kluyveromyces lactis
)
PUF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00806 (PUF)
IPR001313
KLLA0E13685g
T25160_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
KLLA0E13685g
PUF
90
124
ESKGKELKLATSQISSKLMERIIMESDETQLKTIF
KLLA0E13685g
PUF
126
161
AFNGFYFNLACHKYSSHVLETLLVRGAAQVEKELLT
KLLA0E13685g
PUF
185
215
ELQPNLRFMVSHQYASHVLRILILVLSSKTL
KLLA0E13685g
PUF
291
320
KFREICVDKIGSPVIQLVIQVEGIFDRDRS
KLLA0E13685g
PUF
335
368
KEESFVEYLLSDAVGSHFLQNVIASTRIKYVERL
KLLA0E13685g
PUF
372
407
YMKDRIPKLAKRDTTAAFVLQSLLKVLNSKEVKEIM
KLLA0E13685g
PUF
554
586
KDIVNLSCNAYGSHIVDKLWTFTAKLAMYKERI
Links
Other
PUF
family RBPs
Other
Kluyveromyces lactis
RBPs
8 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
12269_YJL010C
Saccharomyces paradoxus
12269_YJL010C
N
0.750
A7TH34_VANPO
Vanderwaltozyma polyspora
A7TH34_VANPO
N
0.743
NOP9
Saccharomyces cerevisiae
YJL010C
N
0.734
ACR046W
Ashbya gossypii
ACR046W
N
0.731
Kwal_2861
Kluyveromyces waltii
Kwal_2861
N
0.731
KLTH0G07612g
Kluyveromyces thermotolerans
KLTH0G07612g
N
0.730
ZYRO0A10648g
Zygosaccharomyces rouxii
ZYRO0A10648g
N
0.721
CAGL0E06534g
Candida glabrata
CAGL0E06534g
N
0.705