CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
CLUG_03544
(
Candida lusitaniae
)
RanBP ZF,RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
PF00076 (RRM_1)
IPR001876
IPR000504
CLUG_03544
T25419_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CLUT_03544
RRM
230
307
LYLSNLPPETTQSELESWFTQYGGRPVAFWTLKNVDADSKSQANKAKGISGFAVFSKHEDAADSLYMNGRVLNDRVVE
CLUT_03544
RanBP ZF
334
363
RPGDWTCPSCGFSNFQRRIACFRCSFPATS
CLUT_03544
RanBP ZF
449
480
RAGDWKCTNESCLYHNFAKNVCCLKCGGARPS
Links
Other
RanBP ZF,RRM
family RBPs
Other
Candida lusitaniae
RBPs
2 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CPAG_02028
Candida parapsilosis
CPAG_02028
N
0.707
PGUG_04435
Candida guilliermondii
PGUG_04435
N
0.700