CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ZRANB3
(
Callithrix jacchus
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
ENSCJAG00000011678
T26335_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCJAP00000021518
RanBP ZF
621
650
PVEGWQCSFCTFINNSVLRYCEMCENPQGS
Links
Other
RanBP ZF
family RBPs
Other
Callithrix jacchus
RBPs
23 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSCJAG00000016365
Callithrix jacchus
ENSCJAG00000016365
N
0.933
ZRANB3
Macaca mulatta
ENSMMUG00000000765
N
0.900
ZRANB3
Gorilla gorilla
ENSGGOG00000003782
N
0.867
ZRANB3
Pan troglodytes
ENSPTRG00000012492
N
0.867
ZRANB3
Homo sapiens
ENSG00000121988
N
0.833
ENSPPYG00000012814
Pongo pygmaeus
ENSPPYG00000012814
N
0.833
ZRANB3
Microcebus murinus
ENSMICG00000013893
N
0.833
ZRANB3
Equus caballus
ENSECAG00000011232
N
0.833
ZRANB3
Tursiops truncatus
ENSTTRG00000003932
N
0.800
ZRANB3
Echinops telfairi
ENSETEG00000011048
N
0.800
ZRANB3
Choloepus hoffmanni
ENSCHOG00000011223
N
0.800
ZRANB3
Bos taurus
ENSBTAG00000026842
N
0.767
ZRANB3
Ochotona princeps
ENSOPRG00000001431
N
0.767
ZRANB3
Loxodonta africana
ENSLAFG00000015733
N
0.767
Zranb3
Dipodomys ordii
ENSDORG00000004211
N
0.767
ZRANB3
Spermophilus tridecemlineatus
ENSSTOG00000010155
N
0.742
ZRANB3
Tarsius syrichta
ENSTSYG00000002816
N
0.742
ZRANB3
Cavia porcellus
ENSCPOG00000010385
N
0.733
ZRANB3
Dasypus novemcinctus
ENSDNOG00000013613
N
0.733
ZRANB3
Sorex araneus
ENSSARG00000007481
N
0.733
ZRANB3
Erinaceus europaeus
ENSEEUG00000011221
N
0.733
ZRANB3
Vicugna pacos
ENSVPAG00000001487
N
0.700
Ame_R008895
Ailuropoda melanoleuca
Ame_R008895
N
0.700