CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSGACG00000010107
(
Gasterosteus aculeatus
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
ENSGACG00000010107
T26487_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGACP00000013349
RanBP ZF
590
619
EGAQWNCESCTFLNHPALNRCEQCEMPRYT
ENSGACP00000013353
RanBP ZF
147
176
EGAQWNCESCTFLNHPALNRCEQCEMPRYT
Links
Other
RanBP ZF
family RBPs
Other
Gasterosteus aculeatus
RBPs
83 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TAB3
Monodelphis domestica
ENSMODG00000021127
N
0.967
TAB3
Procavia capensis
ENSPCAG00000001132
N
0.933
TAB3
Dasypus novemcinctus
ENSDNOG00000002862
N
0.933
ENSORLG00000005575
Oryzias latipes
ENSORLG00000005575
N
0.933
TAB3
Ochotona princeps
ENSOPRG00000002406
N
0.933
ENSPPYG00000020219
Pongo pygmaeus
ENSPPYG00000020219
N
0.933
TAB3
Otolemur garnettii
ENSOGAG00000008205
N
0.933
XR_022720.1
Pan troglodytes
ENSPTRG00000021771
N
0.933
TAB3
Sus scrofa
ENSSSCG00000012203
N
0.933
TAB3
Spermophilus tridecemlineatus
ENSSTOG00000008764
N
0.933
TAB3
Tupaia belangeri
ENSTBEG00000009424
N
0.933
TAB3
Canis familiaris
ENSCAFG00000013747
N
0.933
TAB3
Sorex araneus
ENSSARG00000011882
N
0.933
TAB3
Cavia porcellus
ENSCPOG00000004407
N
0.933
TAB3
Callithrix jacchus
ENSCJAG00000007710
N
0.933
TAB3
Oryctolagus cuniculus
ENSOCUG00000007836
N
0.933
LOC100051087
Equus caballus
ENSECAG00000017444
N
0.933
TAB3
Felis catus
ENSFCAG00000006233
N
0.933
TAB3
Meleagris gallopavo
ENSMGAG00000014639
N
0.933
TAB3
Microcebus murinus
ENSMICG00000010825
N
0.933
TAB3
Tursiops truncatus
ENSTTRG00000007031
N
0.933
TAB3
Loxodonta africana
ENSLAFG00000011430
N
0.933
TAB3
Homo sapiens
ENSG00000157625
N
0.933
TAB3
Gorilla gorilla
ENSGGOG00000025392
N
0.933
TAB3
Macaca mulatta
ENSMMUG00000013981
N
0.933
TAB3
Myotis lucifugus
ENSMLUG00000000437
N
0.933
Ame_R019926
Ailuropoda melanoleuca
Ame_R019926
N
0.933
Tab3
Mus musculus
ENSMUSG00000035476
N
0.933
TAB3
Tarsius syrichta
ENSTSYG00000002270
N
0.933
TAB3
Echinops telfairi
ENSETEG00000013753
N
0.900
ENSTRUG00000017685
Takifugu rubripes
ENSTRUG00000017685
N
0.900
ENSTNIG00000015537
Tetraodon nigroviridis
ENSTNIG00000015537
N
0.900
tab3
Danio rerio
ENSDARG00000062063
N
0.900
TAB3
Ornithorhynchus anatinus
ENSOANG00000010902
N
0.871
TAB2
Ornithorhynchus anatinus
ENSOANG00000001062
N
0.867
TAB2
Anolis carolinensis
ENSACAG00000006999
N
0.867
Q7ZXH3
Xenopus laevis
Q7ZXH3
N
0.867
AAH44992
Xenopus laevis
AAH44992
N
0.867
tab3
Xenopus tropicalis
ENSXETG00000010567
N
0.867
Ame_R008667
Ailuropoda melanoleuca
Ame_R008667
N
0.833
TAB2
Dasypus novemcinctus
ENSDNOG00000005946
N
0.833
TAB2
Echinops telfairi
ENSETEG00000010784
N
0.833
TAB2
Felis catus
ENSFCAG00000011287
N
0.833
TAB2
Homo sapiens
ENSG00000055208
N
0.833
TAB2
Erinaceus europaeus
ENSEEUG00000004162
N
0.833
TAB2
Equus caballus
ENSECAG00000017989
N
0.833
TAB2
Callithrix jacchus
ENSCJAG00000019580
N
0.833
TAB2
Cavia porcellus
ENSCPOG00000015012
N
0.833
Tab2
Dipodomys ordii
ENSDORG00000000707
N
0.833
TAB2
Canis familiaris
ENSCAFG00000000373
N
0.833
TAB2
Tupaia belangeri
ENSTBEG00000010237
N
0.833
TAB2
Ochotona princeps
ENSOPRG00000014017
N
0.833
TAB2
Oryctolagus cuniculus
ENSOCUG00000012180
N
0.833
TAB2
Procavia capensis
ENSPCAG00000015182
N
0.833
ENSPPYG00000017085
Pongo pygmaeus
ENSPPYG00000017085
N
0.833
TAB2
Pteropus vampyrus
ENSPVAG00000000744
N
0.833
Tab2
Mus musculus
ENSMUSG00000015755
N
0.833
MAP3K7IP2
Macaca mulatta
ENSMMUG00000014995
N
0.833
TAB2
Gorilla gorilla
ENSGGOG00000016734
N
0.833
MAP3K7IP2
Gallus gallus
ENSGALG00000012356
N
0.833
TAB2
Loxodonta africana
ENSLAFG00000028106
N
0.833
TAB2
Meleagris gallopavo
ENSMGAG00000012593
N
0.833
TAB2
Myotis lucifugus
ENSMLUG00000005344
N
0.833
Map3k7ip2
Rattus norvegicus
ENSRNOG00000016054
N
0.833
TAB2
Pan troglodytes
ENSPTRG00000018690
N
0.833
TAB2
Tursiops truncatus
ENSTTRG00000000705
N
0.833
MAP3K7IP2
Taeniopygia guttata
ENSTGUG00000010670
N
0.833
TAB2
Sorex araneus
ENSSARG00000010468
N
0.833
TAB2
Spermophilus tridecemlineatus
ENSSTOG00000008729
N
0.833
TAB2
Vicugna pacos
ENSVPAG00000010086
N
0.833
TAB2
Sus scrofa
ENSSSCG00000004110
N
0.833
TAB2
Takifugu rubripes
ENSTRUG00000007732
N
0.800
TAB2
Monodelphis domestica
ENSMODG00000016831
N
0.800
TAB2
Gasterosteus aculeatus
ENSGACG00000006629
N
0.800
TAB2
Bos taurus
ENSBTAG00000013454
N
0.800
tab2
Xenopus tropicalis
ENSXETG00000021389
N
0.800
fgenesh2_pg.C_sca_6000167
Lottia gigantea
fgenesh2_pg.C_sca_6000167
N
0.767
TAB2
Tetraodon nigroviridis
ENSTNIG00000002705
N
0.767
TAB2
Oryzias latipes
ENSORLG00000015273
N
0.733
tab2
Danio rerio
ENSDARG00000021509
N
0.700
estExt_fgenesh2_pg.C_1760026
Branchiostoma floridae
estExt_fgenesh2_pg.C_1760026
N
0.700
estExt_fgenesh2_pg.C_1410011
Branchiostoma floridae
estExt_fgenesh2_pg.C_1410011
N
0.700