CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSORLG00000005575
(
Oryzias latipes
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
ENSORLG00000005575
T26684_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSORLP00000007013
RanBP ZF
594
621
EGAQWNCESCTFLNHPALNRCEQCEMPR
Links
Other
RanBP ZF
family RBPs
Other
Oryzias latipes
RBPs
82 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSGACG00000010107
Gasterosteus aculeatus
ENSGACG00000010107
N
0.933
ENSTRUG00000017685
Takifugu rubripes
ENSTRUG00000017685
N
0.931
tab3
Danio rerio
ENSDARG00000062063
N
0.931
TAB3
Monodelphis domestica
ENSMODG00000021127
N
0.900
TAB2
Anolis carolinensis
ENSACAG00000006999
N
0.897
TAB2
Ornithorhynchus anatinus
ENSOANG00000001062
N
0.897
TAB3
Myotis lucifugus
ENSMLUG00000000437
N
0.867
TAB3
Tarsius syrichta
ENSTSYG00000002270
N
0.867
TAB3
Gorilla gorilla
ENSGGOG00000025392
N
0.867
TAB3
Meleagris gallopavo
ENSMGAG00000014639
N
0.867
Ame_R019926
Ailuropoda melanoleuca
Ame_R019926
N
0.867
TAB3
Loxodonta africana
ENSLAFG00000011430
N
0.867
TAB3
Microcebus murinus
ENSMICG00000010825
N
0.867
TAB3
Homo sapiens
ENSG00000157625
N
0.867
TAB3
Dasypus novemcinctus
ENSDNOG00000002862
N
0.867
LOC100051087
Equus caballus
ENSECAG00000017444
N
0.867
TAB3
Echinops telfairi
ENSETEG00000013753
N
0.867
TAB3
Felis catus
ENSFCAG00000006233
N
0.867
TAB3
Callithrix jacchus
ENSCJAG00000007710
N
0.867
TAB3
Cavia porcellus
ENSCPOG00000004407
N
0.867
TAB3
Canis familiaris
ENSCAFG00000013747
N
0.867
TAB3
Tursiops truncatus
ENSTTRG00000007031
N
0.867
XR_022720.1
Pan troglodytes
ENSPTRG00000021771
N
0.867
TAB3
Oryctolagus cuniculus
ENSOCUG00000007836
N
0.867
TAB3
Sorex araneus
ENSSARG00000011882
N
0.867
TAB3
Otolemur garnettii
ENSOGAG00000008205
N
0.867
ENSPPYG00000020219
Pongo pygmaeus
ENSPPYG00000020219
N
0.867
TAB3
Procavia capensis
ENSPCAG00000001132
N
0.867
TAB3
Ochotona princeps
ENSOPRG00000002406
N
0.867
TAB3
Sus scrofa
ENSSSCG00000012203
N
0.867
Tab3
Mus musculus
ENSMUSG00000035476
N
0.867
TAB3
Spermophilus tridecemlineatus
ENSSTOG00000008764
N
0.867
TAB3
Tupaia belangeri
ENSTBEG00000009424
N
0.867
ENSTNIG00000015537
Tetraodon nigroviridis
ENSTNIG00000015537
N
0.867
TAB3
Macaca mulatta
ENSMMUG00000013981
N
0.867
MAP3K7IP2
Macaca mulatta
ENSMMUG00000014995
N
0.862
TAB2
Equus caballus
ENSECAG00000017989
N
0.862
TAB2
Echinops telfairi
ENSETEG00000010784
N
0.862
TAB2
Erinaceus europaeus
ENSEEUG00000004162
N
0.862
TAB2
Meleagris gallopavo
ENSMGAG00000012593
N
0.862
TAB2
Ochotona princeps
ENSOPRG00000014017
N
0.862
TAB2
Oryctolagus cuniculus
ENSOCUG00000012180
N
0.862
MAP3K7IP2
Gallus gallus
ENSGALG00000012356
N
0.862
Tab2
Mus musculus
ENSMUSG00000015755
N
0.862
TAB2
Myotis lucifugus
ENSMLUG00000005344
N
0.862
TAB2
Homo sapiens
ENSG00000055208
N
0.862
TAB2
Gorilla gorilla
ENSGGOG00000016734
N
0.862
TAB2
Loxodonta africana
ENSLAFG00000028106
N
0.862
TAB2
Felis catus
ENSFCAG00000011287
N
0.862
TAB2
Callithrix jacchus
ENSCJAG00000019580
N
0.862
TAB2
Spermophilus tridecemlineatus
ENSSTOG00000008729
N
0.862
TAB2
Sus scrofa
ENSSSCG00000004110
N
0.862
TAB2
Sorex araneus
ENSSARG00000010468
N
0.862
TAB2
Tupaia belangeri
ENSTBEG00000010237
N
0.862
Tab2
Dipodomys ordii
ENSDORG00000000707
N
0.862
TAB2
Tursiops truncatus
ENSTTRG00000000705
N
0.862
TAB2
Vicugna pacos
ENSVPAG00000010086
N
0.862
Ame_R008667
Ailuropoda melanoleuca
Ame_R008667
N
0.862
Map3k7ip2
Rattus norvegicus
ENSRNOG00000016054
N
0.862
TAB2
Cavia porcellus
ENSCPOG00000015012
N
0.862
TAB2
Procavia capensis
ENSPCAG00000015182
N
0.862
TAB2
Dasypus novemcinctus
ENSDNOG00000005946
N
0.862
ENSPPYG00000017085
Pongo pygmaeus
ENSPPYG00000017085
N
0.862
TAB2
Canis familiaris
ENSCAFG00000000373
N
0.862
MAP3K7IP2
Taeniopygia guttata
ENSTGUG00000010670
N
0.862
TAB2
Pteropus vampyrus
ENSPVAG00000000744
N
0.862
TAB2
Pan troglodytes
ENSPTRG00000018690
N
0.862
TAB3
Ornithorhynchus anatinus
ENSOANG00000010902
N
0.839
tab3
Xenopus tropicalis
ENSXETG00000010567
N
0.833
AAH44992
Xenopus laevis
AAH44992
N
0.833
Q7ZXH3
Xenopus laevis
Q7ZXH3
N
0.833
TAB2
Bos taurus
ENSBTAG00000013454
N
0.828
TAB2
Gasterosteus aculeatus
ENSGACG00000006629
N
0.828
tab2
Xenopus tropicalis
ENSXETG00000021389
N
0.828
TAB2
Takifugu rubripes
ENSTRUG00000007732
N
0.828
TAB2
Monodelphis domestica
ENSMODG00000016831
N
0.828
fgenesh2_pg.C_sca_6000167
Lottia gigantea
fgenesh2_pg.C_sca_6000167
N
0.821
TAB2
Tetraodon nigroviridis
ENSTNIG00000002705
N
0.793
TAB2
Oryzias latipes
ENSORLG00000015273
N
0.759
estExt_fgenesh2_pg.C_1410011
Branchiostoma floridae
estExt_fgenesh2_pg.C_1410011
N
0.750
estExt_fgenesh2_pg.C_1760026
Branchiostoma floridae
estExt_fgenesh2_pg.C_1760026
N
0.750
tab2
Danio rerio
ENSDARG00000021509
N
0.724