CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AAH44992
(
Xenopus laevis
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
AAH44992
T27929_0.6
Xenbase (2010-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAH44992
RanBP ZF
663
692
EGSPWNCNSCTFLNHPALNRCEQCEMPRFT
Links
Other
RanBP ZF
family RBPs
Other
Xenopus laevis
RBPs
79 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Q7ZXH3
Xenopus laevis
Q7ZXH3
N
1.000
tab3
Xenopus tropicalis
ENSXETG00000010567
N
1.000
TAB3
Monodelphis domestica
ENSMODG00000021127
N
0.900
TAB3
Otolemur garnettii
ENSOGAG00000008205
N
0.900
TAB3
Oryctolagus cuniculus
ENSOCUG00000007836
N
0.900
TAB3
Macaca mulatta
ENSMMUG00000013981
N
0.900
TAB3
Myotis lucifugus
ENSMLUG00000000437
N
0.900
TAB3
Loxodonta africana
ENSLAFG00000011430
N
0.900
TAB3
Meleagris gallopavo
ENSMGAG00000014639
N
0.900
TAB3
Microcebus murinus
ENSMICG00000010825
N
0.900
TAB3
Ochotona princeps
ENSOPRG00000002406
N
0.900
ENSPPYG00000020219
Pongo pygmaeus
ENSPPYG00000020219
N
0.900
TAB3
Tupaia belangeri
ENSTBEG00000009424
N
0.900
TAB3
Tarsius syrichta
ENSTSYG00000002270
N
0.900
TAB3
Tursiops truncatus
ENSTTRG00000007031
N
0.900
Ame_R019926
Ailuropoda melanoleuca
Ame_R019926
N
0.900
TAB3
Spermophilus tridecemlineatus
ENSSTOG00000008764
N
0.900
TAB3
Sus scrofa
ENSSSCG00000012203
N
0.900
TAB3
Gorilla gorilla
ENSGGOG00000025392
N
0.900
XR_022720.1
Pan troglodytes
ENSPTRG00000021771
N
0.900
TAB3
Sorex araneus
ENSSARG00000011882
N
0.900
TAB3
Procavia capensis
ENSPCAG00000001132
N
0.900
Tab3
Mus musculus
ENSMUSG00000035476
N
0.900
LOC100051087
Equus caballus
ENSECAG00000017444
N
0.900
TAB3
Callithrix jacchus
ENSCJAG00000007710
N
0.900
TAB3
Cavia porcellus
ENSCPOG00000004407
N
0.900
TAB3
Canis familiaris
ENSCAFG00000013747
N
0.900
TAB3
Felis catus
ENSFCAG00000006233
N
0.900
TAB3
Dasypus novemcinctus
ENSDNOG00000002862
N
0.900
TAB3
Homo sapiens
ENSG00000157625
N
0.900
TAB3
Ornithorhynchus anatinus
ENSOANG00000010902
N
0.871
TAB3
Echinops telfairi
ENSETEG00000013753
N
0.867
ENSGACG00000010107
Gasterosteus aculeatus
ENSGACG00000010107
N
0.867
ENSORLG00000005575
Oryzias latipes
ENSORLG00000005575
N
0.833
tab3
Danio rerio
ENSDARG00000062063
N
0.800
TAB2
Ornithorhynchus anatinus
ENSOANG00000001062
N
0.800
ENSTRUG00000017685
Takifugu rubripes
ENSTRUG00000017685
N
0.800
TAB2
Anolis carolinensis
ENSACAG00000006999
N
0.800
TAB2
Pteropus vampyrus
ENSPVAG00000000744
N
0.767
TAB2
Cavia porcellus
ENSCPOG00000015012
N
0.767
TAB2
Sorex araneus
ENSSARG00000010468
N
0.767
Map3k7ip2
Rattus norvegicus
ENSRNOG00000016054
N
0.767
TAB2
Sus scrofa
ENSSSCG00000004110
N
0.767
TAB2
Tupaia belangeri
ENSTBEG00000010237
N
0.767
TAB2
Canis familiaris
ENSCAFG00000000373
N
0.767
TAB2
Vicugna pacos
ENSVPAG00000010086
N
0.767
tab2
Xenopus tropicalis
ENSXETG00000021389
N
0.767
Ame_R008667
Ailuropoda melanoleuca
Ame_R008667
N
0.767
TAB2
Tursiops truncatus
ENSTTRG00000000705
N
0.767
TAB2
Takifugu rubripes
ENSTRUG00000007732
N
0.767
TAB2
Callithrix jacchus
ENSCJAG00000019580
N
0.767
MAP3K7IP2
Taeniopygia guttata
ENSTGUG00000010670
N
0.767
ENSTNIG00000015537
Tetraodon nigroviridis
ENSTNIG00000015537
N
0.767
TAB2
Spermophilus tridecemlineatus
ENSSTOG00000008729
N
0.767
TAB2
Procavia capensis
ENSPCAG00000015182
N
0.767
TAB2
Felis catus
ENSFCAG00000011287
N
0.767
TAB2
Myotis lucifugus
ENSMLUG00000005344
N
0.767
MAP3K7IP2
Macaca mulatta
ENSMMUG00000014995
N
0.767
MAP3K7IP2
Gallus gallus
ENSGALG00000012356
N
0.767
TAB2
Homo sapiens
ENSG00000055208
N
0.767
TAB2
Meleagris gallopavo
ENSMGAG00000012593
N
0.767
TAB2
Gorilla gorilla
ENSGGOG00000016734
N
0.767
TAB2
Gasterosteus aculeatus
ENSGACG00000006629
N
0.767
TAB2
Loxodonta africana
ENSLAFG00000028106
N
0.767
TAB2
Echinops telfairi
ENSETEG00000010784
N
0.767
TAB2
Pan troglodytes
ENSPTRG00000018690
N
0.767
TAB2
Ochotona princeps
ENSOPRG00000014017
N
0.767
TAB2
Dasypus novemcinctus
ENSDNOG00000005946
N
0.767
ENSPPYG00000017085
Pongo pygmaeus
ENSPPYG00000017085
N
0.767
Tab2
Mus musculus
ENSMUSG00000015755
N
0.767
Tab2
Dipodomys ordii
ENSDORG00000000707
N
0.767
TAB2
Erinaceus europaeus
ENSEEUG00000004162
N
0.767
TAB2
Equus caballus
ENSECAG00000017989
N
0.767
TAB2
Oryctolagus cuniculus
ENSOCUG00000012180
N
0.767
TAB2
Monodelphis domestica
ENSMODG00000016831
N
0.733
fgenesh2_pg.C_sca_6000167
Lottia gigantea
fgenesh2_pg.C_sca_6000167
N
0.733
TAB2
Bos taurus
ENSBTAG00000013454
N
0.733
TAB2
Oryzias latipes
ENSORLG00000015273
N
0.733
TAB2
Tetraodon nigroviridis
ENSTNIG00000002705
N
0.700