Cucsa.012170 (Cucumis sativus)
RanBP ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00641 (zf-RanBP) IPR001876 Cucsa.012170 T27335_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.012170.1 RanBP ZF 183 206
Cucsa.012170.1 RanBP ZF 226 251
Cucsa.012170.1 RanBP ZF 260 284

Links

Other RanBP ZF family RBPs
Other Cucumis sativus RBPs

7 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PK11073.1 Cannabis sativa PK11073.1 N 0.741
MDP0000243554 Malus x domestica MDP0000243554 N 0.738
MDP0000132719 Malus x domestica MDP0000132719 N 0.738
ppa003582m Prunus persica ppa003582m N 0.726
B9HW23_POPTR Populus trichocarpa POPTR_0010s11770 N 0.714
Glyma02g09300.1 Glycine max Glyma02g09300.1 N 0.713
cassava40376.m1 Manihot esculenta cassava40376.m1 N 0.706