CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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e_gw.269.58.1
(
Branchiostoma floridae
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
e_gw.269.58.1
T27375_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw.269.58.1
RanBP ZF
182
210
ALGWSCPVCTFVNQPTRPGCEMCGAPRPE
Links
Other
RanBP ZF
family RBPs
Other
Branchiostoma floridae
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
fgenesh2_pm.scaffold_19000033
Branchiostoma floridae
fgenesh2_pm.scaffold_19000033
N
1.000
RBCK1
Monodelphis domestica
ENSMODG00000019512
N
0.759
RBCK1
Oryzias latipes
ENSORLG00000006036
N
0.724