CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RBCK1
(
Monodelphis domestica
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
ENSMODG00000019512
T26614_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMODP00000024343
RanBP ZF
192
218
GWGCPGCTFVNKPTRPGCEMCCAARPE
Links
Other
RanBP ZF
family RBPs
Other
Monodelphis domestica
RBPs
32 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RBCK1
Cavia porcellus
ENSCPOG00000005720
N
0.889
Q1JPC8_BOVIN
Bos taurus
ENSBTAG00000017002
N
0.852
Rbck1
Mus musculus
ENSMUSG00000027466
N
0.852
Ame_R013963
Ailuropoda melanoleuca
Ame_R013963
N
0.852
RBCK1
Gorilla gorilla
ENSGGOG00000008982
N
0.852
RBCK1
Canis familiaris
ENSCAFG00000006921
N
0.852
A6ML91_CALJA
Callithrix jacchus
ENSCJAG00000020846
N
0.852
RBCK1
Felis catus
ENSFCAG00000003278
N
0.852
RBCK1
Erinaceus europaeus
ENSEEUG00000013802
N
0.852
RBCK1
Microcebus murinus
ENSMICG00000013495
N
0.852
RBCK1
Loxodonta africana
ENSLAFG00000027558
N
0.852
RBCK1
Vicugna pacos
ENSVPAG00000000451
N
0.852
RBCK1
Pan troglodytes
ENSPTRG00000013144
N
0.852
ENSPPYG00000010868
Pongo pygmaeus
ENSPPYG00000010868
N
0.852
RBCK1
Procavia capensis
ENSPCAG00000001109
N
0.852
RBCK1
Oryctolagus cuniculus
ENSOCUG00000007636
N
0.852
RBCK1
Pteropus vampyrus
ENSPVAG00000011249
N
0.852
Rbck1
Rattus norvegicus
ENSRNOG00000006695
N
0.852
RBCK1
Tursiops truncatus
ENSTTRG00000005104
N
0.852
RBCK1
Macaca mulatta
ENSMMUG00000012601
N
0.852
RBCK1
Tupaia belangeri
ENSTBEG00000013740
N
0.852
RBCK1
Spermophilus tridecemlineatus
ENSSTOG00000008625
N
0.852
RBCK1
Homo sapiens
ENSG00000125826
N
0.852
RBCK1
Dasypus novemcinctus
ENSDNOG00000017407
N
0.767
fgenesh2_pm.scaffold_19000033
Branchiostoma floridae
fgenesh2_pm.scaffold_19000033
N
0.759
e_gw.269.58.1
Branchiostoma floridae
e_gw.269.58.1
N
0.759
ENSMGAG00000007903
Meleagris gallopavo
ENSMGAG00000007903
N
0.741
SHARPIN
Anolis carolinensis
ENSACAG00000007245
N
0.741
rbck1
Danio rerio
ENSDARG00000031954
N
0.714
SHARPIN
Gallus gallus
ENSGALG00000022341
N
0.714
ENSTRUG00000006949
Takifugu rubripes
ENSTRUG00000006949
N
0.704
ENSGACG00000017834
Gasterosteus aculeatus
ENSGACG00000017834
N
0.704