CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MGG_03053
(
Magnaporthe oryzae
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
MGG_03053
T29748_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
MGG_03053T0
RRM
134
203
VLIRRLPLNTSKESIRLMLVFCEELVDVDVLPAEHSEDPGFRSALVKVKTPAGAQNIKSMLDGKSNISND
MGG_03053T0
RRM
420
484
LYVGNLPIDTSEEELKATFSKQRGYKRLCFRTKQNGPMCFVEFEDVSFATKALHELYGHMLHNSV
Links
Other
RRM
family RBPs
Other
Magnaporthe oryzae
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GLRG_02493
Colletotrichum graminicola
GLRG_02493
N
0.830
e_gw1.2.4074.1
Myceliophthora thermophila
e_gw1.2.4074.1
N
0.807
CHGG_06237
Chaetomium globosum
CHGG_06237
N
0.800
estExt_Genewise1.C_14390
Thielavia terrestris
estExt_Genewise1.C_14390
N
0.763