CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MGG_12370
(
Magnaporthe oryzae
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
MGG_12370
T29790_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
MGG_12370T0
RRM
170
240
IYIGHIPYGFFEHEIRQYLSQFGTITNLRLSRNKKTGASKGYAFVEFQDASTAAIVAKTMDAYLLFGRILK
Links
Other
RRM
family RBPs
Other
Magnaporthe oryzae
RBPs
7 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
FGSG_04392
Fusarium graminearum
FGSG_04392
N
0.775
e_gw1.11.592.1
Nectria haematococca
e_gw1.11.592.1
N
0.775
FVEG_11271
Fusarium verticillioides
FVEG_11271
N
0.761
FOXG_13842
Fusarium oxysporum
FOXG_13842
N
0.761
estExt_fgenesh1_pg.C_90140
Trichoderma atroviride
estExt_fgenesh1_pg.C_90140
N
0.761
e_gw1.17.425.1
Trichoderma virens
e_gw1.17.425.1
N
0.746
e_gw1.1.997.1
Trichoderma reesei
e_gw1.1.997.1
N
0.746