estExt_fgenesh1_kg.C_50066 (Myceliophthora thermophila)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_fgenesh1_kg.C_50066 T50428_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_kg.C_50066 RRM 70 139

Links

Other RRM family RBPs
Other Myceliophthora thermophila RBPs

51 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CHGG_08656 Chaetomium globosum CHGG_08656 N 0.986
estExt_fgenesh2_kg.C_50198 Thielavia terrestris estExt_fgenesh2_kg.C_50198 N 0.971
VDAG_00074 Verticillium dahliae VDAG_00074 N 0.901
e_gw1.5.977.1 Nectria haematococca e_gw1.5.977.1 N 0.901
VDBG_00465 Verticillium albo atrum VDBG_00465 N 0.901
NCU03946 Neurospora crassa NCU03946 N 0.901
gw1.9.853.1 Trichoderma virens gw1.9.853.1 N 0.901
e_gw1.4.511.1 Trichoderma reesei e_gw1.4.511.1 N 0.901
GLRG_10164 Colletotrichum graminicola GLRG_10164 N 0.901
estExt_fgenesh2_kg.C_20042 Neurospora tetrasperma estExt_fgenesh2_kg.C_20042 N 0.901
estExt_fgenesh3_kg.C_60298 Neurospora discreta estExt_fgenesh3_kg.C_60298 N 0.901
estExt_fgenesh1_pm.C_10632 Trichoderma atroviride estExt_fgenesh1_pm.C_10632 N 0.901
MGG_07252 Magnaporthe oryzae MGG_07252 N 0.887
Pa_4_2600 Podospora anserina Pa_4_2600 N 0.886
FOXG_05189 Fusarium oxysporum FOXG_05189 N 0.873
e_gw1.7.1421.1 Cryphonectria parasitica e_gw1.7.1421.1 N 0.873
FVEG_02944 Fusarium verticillioides FVEG_02944 N 0.873
UREG_05781 Uncinocarpus reesii UREG_05781 N 0.859
MGYG_08646 Microsporum gypseum MGYG_08646 N 0.859
TERG_02884 Trichophyton rubrum TERG_02884 N 0.859
ACLA_026010 Aspergillus clavatus CADACLAG00002760 N 0.859
TESG_01534 Trichophyton tonsurans TESG_01534 N 0.859
ANIA_01340 Aspergillus nidulans CADANIAG00001272 N 0.859
BC1G_07056 Botrytis cinerea BC1G_07056 N 0.859
AFUA_1G09490 Aspergillus fumigatus CADAFUAG00007045 N 0.859
SS1G_03706 Sclerotinia sclerotiorum SS1G_03706 N 0.859
fgenesh1_pm.00083_#_765 Aspergillus carbonarius fgenesh1_pm.00083_#_765 N 0.859
NFIA_016120 Neosartorya fischeri CADNFIAG00000670 N 0.859
AO090012000924 Aspergillus oryzae CADAORAG00006445 N 0.845
An08g01040 Aspergillus niger CADANGAG00006423 N 0.845
PABG_00587 Paracoccidioides brasiliensis PABG_00587 N 0.845
CIMG_07119 Coccidioides immitis CIMG_07119 N 0.845
MCYG_08495 Microsporum canis MCYG_08495 N 0.845
CPSG_01188 Coccidioides posadasii CPSG_01188 N 0.845
BDBG_02376 Blastomyces dermatitidis BDBG_02376 N 0.845
PMAA_025390 Penicillium marneffei PMAA_025390 N 0.845
FGSG_10271 Fusarium graminearum FGSG_10271 N 0.845
Pc16g02770 Penicillium chrysogenum Pc16g02770 N 0.845
GSTUMT00011743001 Tuber melanosporum GSTUMT00011743001 N 0.831
estExt_Genewise1Plus.C_chr_120039 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_120039 N 0.817
EAT87520.1 Phaeosphaeria nodorum EAT87520.1 N 0.761
SNOG_05129 Stagonospora nodorum SNOG_05129 N 0.761
SPPG_00782 Spizellomyces punctatus SPPG_00782 N 0.746
AB03725.1 Alternaria brassicicola AB03725.1 N 0.746
estExt_Genewise1.C_100240 Cochliobolus heterostrophus C5 estExt_Genewise1.C_100240 N 0.746
PTRG_03828 Pyrenophora tritici repentis PTRG_03828 N 0.746
UM02401 Ustilago maydis UM02401 N 0.718
gw1.7.208.1 Melampsora laricis populina gw1.7.208.1 N 0.704
estExt_fgenesh1_pm.C_10518 Schizophyllum commune estExt_fgenesh1_pm.C_10518 N 0.700
SOCG_03627 Schizosaccharomyces octosporus SOCG_03627 N 0.700
SPOG_04110 Schizosaccharomyces cryophilus SPOG_04110 N 0.700