CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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DGIL_AUG5s6024g1t1
(
Acyrtosiphon pisum
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
DGIL_AUG5s6024g1t1
T32082_0.6
DroSpeGe (2008-Jul-18)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
DGIL_AUG5s6024g1t1
RRM
10
80
LFIGMLSKKISEPDIRLMFEPFGAIEECSVLRDPNGVSKGCAFVTYTTKQNAIAAIKGMHHSQTMEGCTCP
DGIL_AUG5s6024g1t1
RRM
307
377
LFIYHLPQDFADSDLVTMFLPFGNVISAKVYIDKETKLSKCFGFVSYDNAYSAQAAIQTMNSYQVGNKRLK
Links
Other
RRM
family RBPs
Other
Acyrtosiphon pisum
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
BGIBMGA010431
Bombyx mori
BGIBMGA010431
I
0.718
CELF2
Ornithorhynchus anatinus
ENSOANG00000015432
I
0.704
CELF2
Gorilla gorilla
ENSGGOG00000009330
I
0.704
LOC100391960
Callithrix jacchus
ENSCJAG00000020663
I
0.704
Q2KI16_BOVIN
Bos taurus
ENSBTAG00000008937
I
0.704