CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AAEL004010
(
Aedes aegypti
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
AAEL004010
T32334_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAEL004010-PA
RRM
31
98
AYVGNLPQGVVQGDLNKIFQDYTVKNIRLVKDKETDVFKGFCYVEFGTLDELKQALDLDGVIMLNDSF
AAEL004010-PB
RRM
31
98
AYVGNLPQGVVQGDLNKIFQDYTVKNIRLVKDKETDVFKGFCYVEFGTLDELKQALDLDGVIMLNDSF
AAEL004010-PC
RRM
31
98
AYVGNLPQGVVQGDLNKIFQDYTVKNIRLVKDKETDVFKGFCYVEFGTLDELKQALDLDGVIMLNDSF
AAEL004010-PD
RRM
31
98
AYVGNLPQGVVQGDLNKIFQDYTVKNIRLVKDKETDVFKGFCYVEFGTLDELKQALDLDGVIMLNDSF
Links
Other
RRM
family RBPs
Other
Aedes aegypti
RBPs
8 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CpipJ_CPIJ007629
Culex pipiens
CpipJ_CPIJ007629
N
0.870
CPIJ007629
Culex quinquefasciatus
CPIJ007629
N
0.870
AGAP003219
Anopheles gambiae
AGAP003219
N
0.721
GK25675
Drosophila willistoni
FBgn0227634
N
0.706
GF19517
Drosophila ananassae
FBgn0096524
N
0.706
GI21487
Drosophila mojavensis
FBgn0144217
N
0.706
GJ19028
Drosophila virilis
FBgn0206174
N
0.706